Gene Mvan_4135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4135 
Symbol 
ID4648894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4445700 
End bp4447298 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content69% 
IMG OID639807602 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_954918 
Protein GI120405089 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.434999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAGGA TTCCTGCACA ACTCGTCGAG CGCTACCAGC GGGAGGGTTA CTGGACCCAG 
GAAACCCTAG GCGACATGCT GGCCCGGGGG CTGGCCGGCA GTCCCGAGGC CGGCTTCTGC
GTCCACTCGT CGATACGCCC GTACCGGGGC ACGTTCGGCG AGGTCGAACG CGACGCCCGG
CGGCTGGCGG CCGGCCTGCG GGAGCGCGGT GTCGGTCCCG GCGACGTGGT GGCGATGCAG
CTGCCGAACT GGCGCGAAGC TGCCGTCACG TTCTGGGCGT CGGCATTCCT GGGTGCGGTC
GTCGTACCGA TCGTGCACTT CTACGGTCGC AGGGAACTGG CCCACATCAT GGCCACGGCG
AAACCGCGGG TGTTCGTCAC CGCCGAGGAG TTCGGCCGGA TGCGGTACCA GCCCGACCTG
TGTGGCGACG TAGCAGTCGT CGGGCTGGTC GGCGCGGCGC ACCCGGCCGC CGGCAATGAG
CACGCGTTCG AGCAGCTGCT CGCCGACGAG CCGATGGCCG GTACCGTCGC GGCCGACCCC
GCCGCACCCA CCCTGATCGC GTTCACCTCC GGAACCACCC GCGACCCCAA GGGCGTGATC
CACAGCCATC AGACCCTGAG CTGCGAGACG CGTCAGCTGC TGGAGAACTA CCCGCCGGAC
CGGGGGCGCC AGCTGACCGC CACTCCGGTC GGGCATTTCA TCGGCATGCT CGGAGCCTTC
CTGATTCCGG TTCTGGAGGG CGCCCCGATC GACCTGTGCG ACGTCTGGGA TCCCGGTCGG
GTGTTGAAGC TGATCGAGAG CGACGGGCTG TCCATCGGGG GCGGACCGCC GTACTTCGTC
ACCAGCCTGC TCGACCACCC CGACTTCAGG CCGGAGCATC TGCGTCGCTT CAAGACCGTC
GGGCTCGGCG GCTCCACGGT GCCCGCGGCC GTCACGCAGC GGCTGACCGA TCTGGGGTTG
TTCGTGTTCC GCTCCTACGG CAGCACCGAG CACCCGTCGA TCACCGGCTC GCGACCGGAT
GCTCCCGAGG TCAAGCGGCT CTTCACCGAC GGCAACGTGC GTCCCGGGGT CGAGATCAGG
CTCGGTGAGG ACGGCGAGAT CTTCAGCAGG GGCCCTGACC TGTGCCTCGG GTACACCGAC
GACGAGCTGA CCGCTCGCGC CTTCGACGAC GACGGCTGGT ACCGCACCGG CGACGTCGGC
GTGCTCGACG ACGACGGCTA CCTCACCATC ACCGACCGCA AGGCCGACGT GATCATCCGC
GGGGGAGAGA ACATCAGTGC CCTCGAGGTG GAGGAGGTGT TACTGGCCAT GCCCGCCGTC
GCCGAAGCCG TCGTGGTCGC CGCTCCCGAC GCCCGCCTCG GCGAGCACAC CGCTGCGGTA
CTGCGCATCC GGGAAGGGCA GTCCATGCCG GCCCTCGGCG ACGTCCGCGA GCACTTCAAG
CAGGCCGGCG TGGCCACGCA GAAGTGGCCG GAGGAGCTGC ACCGGGTCCC CGAGGGGCAG
GACTTCCCCC GGACTGCGAG CGGCAAGGTG CAGAAGTTCG TCATCCGGCA GCAGCTGGCT
GCCGGCGAGT TGTCGGCCAT TGCGACCGGA CAAGAATGA
 
Protein sequence
MRRIPAQLVE RYQREGYWTQ ETLGDMLARG LAGSPEAGFC VHSSIRPYRG TFGEVERDAR 
RLAAGLRERG VGPGDVVAMQ LPNWREAAVT FWASAFLGAV VVPIVHFYGR RELAHIMATA
KPRVFVTAEE FGRMRYQPDL CGDVAVVGLV GAAHPAAGNE HAFEQLLADE PMAGTVAADP
AAPTLIAFTS GTTRDPKGVI HSHQTLSCET RQLLENYPPD RGRQLTATPV GHFIGMLGAF
LIPVLEGAPI DLCDVWDPGR VLKLIESDGL SIGGGPPYFV TSLLDHPDFR PEHLRRFKTV
GLGGSTVPAA VTQRLTDLGL FVFRSYGSTE HPSITGSRPD APEVKRLFTD GNVRPGVEIR
LGEDGEIFSR GPDLCLGYTD DELTARAFDD DGWYRTGDVG VLDDDGYLTI TDRKADVIIR
GGENISALEV EEVLLAMPAV AEAVVVAAPD ARLGEHTAAV LRIREGQSMP ALGDVREHFK
QAGVATQKWP EELHRVPEGQ DFPRTASGKV QKFVIRQQLA AGELSAIATG QE