| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4050 |
|---|
| Symbol | |
|---|
| ID | 4643473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 4331872 |
|---|
| End bp | 4333560 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639807514 |
|---|
| Product | sodium/hydrogen exchanger |
|---|
| Protein accession | YP_954833 |
|---|
| Protein GI | 120405004 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
|---|
| TIGRFAM ID | [TIGR00831] Na+/H+ antiporter, bacterial form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.553254 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.821739 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAACTGA TCCTGGTAGT CGTGGGCGCG ATCGTCGTCA CAGCGATCGC GCAACGGCGC
GGACTCGAGC CGGCGCTGAT CATCGTCGTC GTCGGCATCG CGGTGTCGTT CGTCCCCGGA
TTCGAGGCGC CCGAGCTGGA CTCGCACATC CTGCTGTCGG TGGTGTTGCC GCCGCTGTTG
TATTCGGCCG CCCTGGATTT CTCGTTCCCG ACGTTCCTGC GCAACATCAA GCCGATCCTG
GGTCTGGGCG TGGGCCTGGT GGTGGTCACC GCGTTCACCG TCGCCGCAGT GTCGTCCTGG
CTCGTCGTCG TCCCGTTGAC GTTCGCGACC GCGCTGGTGC TCGGCGCGGT GGTGGCGCCT
CCCGACGCCG TCACCGCGGT CGCGGTCGGC CGCAAGCTCG GCCTTCCCAA ACGTGTCATG
TCGATTCTGA CGGGGGAGAG CCTGATCAAC GACGCGGCGG CGCTGGCGCT GTTCTCCGTG
GCGGTGGCGC AGGTGGCAGG CAGCCACACG TTCATCGAGA ACCCGCTGCT GCTGTTCGCC
TACAGCGCGG TGCTCGGTCC GCTGGTCGGC GCCGCGCTGG GCTACATCAC GCTGTGGATC
CGCAGGCGGC TGGCCAACCC CGCACTCGAG ACAGTGCAGG GGCTGATGGT GCCTTTTGCG
GCGTTCATCC TGGCCGAGGA GATGCACGCC TCCGGCGTCC TGGCCGTGGT GGTGGCCGGA
TTCGTGGTGG GCAGCGGCAC CGTCGACGCC GGATACCAGA CCCGGCTGCA GGAACGGTTC
GTGTGGAACT CGGTGGACGT GCTGCTCGAA GTGTTCGTGT TCGCCTACAT CGGTCTGCAC
CTGCGTTTCG TGCTGGAGGA TCTGCAGCAG GCGCACGAGT CACTGACCCA GGTGGCGGTG
GCCTCCGCGG TCGTGCTGCT GATCGTGTTG GTGATCCGGC CGTTGTCGGT GTTCGCGATG
TTCGGTCGGG GAGTGCTGGC CCGACAGGTC GAACGACGGC TCAGCGTCCC GATTCCCGAG
GGCGGCGGCC GGGGGGCATT GGGGGTGCGC CGGCAATCGC AGCCGCCGGC CAAGTGGCGG
TCCCGCATCG ACAACCGCGC CCTGAGCTGG CAGGAGAACG TCGTCGTGTC GTGGACGGGC
ATGCGCGGTG TGGTGACGCT GGCGGCCGCC GCGGCGATCC CGGCGACCAC AGCGGCCGGT
GCGCCGTTTC CCGAGCGCGC CACGATCCAG GCGATCGCGT TCGTGGTCAG CGTCGGAACT
CTGCTGCTGC AGGGGTGGAC GCTGCCGCTG CTGATCCGCC GGCTCAAGCT GTCCGCCGAC
GCCGACCAGG CCTACACGTC GGCCGAGACC CAGAAAGCCG AACAGGTGGT TCATGCGGCC
GCCGACGAGG TGTTGGCCGA GTTCCGGGCC AACCCGCCCG ACGGGCTCGA TCCCCGGGTG
CTCGCCGAGA TCGGTGGCAT CGTCGCGCGG CACTCCCAGG ACGCCGACGA AATGCCCGAC
CCCGAGGCGC CGACGTTGCG TGCCGAGGTG TTCGGTCAGC TCTACCGCGA CGTGCTGGCG
GCACAGCGGG TGGCGCTCAT CGGTGAACGG GACGCCGGCC GCATCGACGA AGAGGCGGTG
CGGGCCATGC TTGTTCGGCT CGACCTGCAG GAGGCCGGGG TGTCCGCGCG GCTGGAGAGC
CGCTTCTAG
|
|---|
| Protein sequence | MELILVVVGA IVVTAIAQRR GLEPALIIVV VGIAVSFVPG FEAPELDSHI LLSVVLPPLL
YSAALDFSFP TFLRNIKPIL GLGVGLVVVT AFTVAAVSSW LVVVPLTFAT ALVLGAVVAP
PDAVTAVAVG RKLGLPKRVM SILTGESLIN DAAALALFSV AVAQVAGSHT FIENPLLLFA
YSAVLGPLVG AALGYITLWI RRRLANPALE TVQGLMVPFA AFILAEEMHA SGVLAVVVAG
FVVGSGTVDA GYQTRLQERF VWNSVDVLLE VFVFAYIGLH LRFVLEDLQQ AHESLTQVAV
ASAVVLLIVL VIRPLSVFAM FGRGVLARQV ERRLSVPIPE GGGRGALGVR RQSQPPAKWR
SRIDNRALSW QENVVVSWTG MRGVVTLAAA AAIPATTAAG APFPERATIQ AIAFVVSVGT
LLLQGWTLPL LIRRLKLSAD ADQAYTSAET QKAEQVVHAA ADEVLAEFRA NPPDGLDPRV
LAEIGGIVAR HSQDADEMPD PEAPTLRAEV FGQLYRDVLA AQRVALIGER DAGRIDEEAV
RAMLVRLDLQ EAGVSARLES RF
|
|---|
| |