Gene Mvan_4009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4009 
Symbol 
ID4647465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4289127 
End bp4289951 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content65% 
IMG OID639807471 
ProductABC transporter-related protein 
Protein accessionYP_954792 
Protein GI120404963 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATCT CTGTCGAAAA GCCCAGCAGC GACGCGCAAG CCGGAGGCAA GGTGCCTCTG 
GTCGAGTTGA AGAACGTCGG CAAGTCCTAC GGCAACATCA CGGCGCTCAA GGACATCTGC
CTGCGGGTGC ACGCCGGCGA GGTCACCGGC ATCCTCGGCG ACAACGGTGC GGGCAAGTCC
ACTCTGATCA AGATCATCGC CGGGCTGCAT CAGCAGACCG AGGGGCAACT GCTCGTCGAC
GGCGAACCGA CCAAGTTCGC CTCCCCGGCG GAGGCGTTGG GCAAGGGCAT CGCGACGGTG
TACCAGAACC TGGCGGTCGT GCCGCTGATG CCGGTGTGGC GCAATTTCTT CCTCGGTCAG
GAGCTGCGCA AGAAGTCGTT TCCGTTCTCG TTGGACGCCG ACGCGATGCG GGCCACCACG
TTGACCGAAC TGTCCAAGAT GGGCATCGAC CTGCCCGATG TCGACGTTCC GATCGGCTCC
CTGTCGGGCG GTCAGAAGCA GTGTGTGGCG ATCGCGCGGG CGGTGTTCTT CGGGGCGCGG
GTGCTGATCC TCGACGAACC GACGGCGGCG CTGGGCGTCA AACAGTCCGG GGTGGTGCTC
AAGTACATCA CCGCGGCCAA GGAGGCCGGC TTCGGAGTCG TGTTCATCAC CCACAACCCG
CACCACGCGC ATCTGGTCGG CGACCACTTC GTCCTGCTCA ACCGCGGCAG GCAGAAGCTC
GACTGCACCT ACGACGACAT TACGCTGGAG CACCTCACCC AGGAGATGGC CGGCGGCGAC
GAACTCGAGG CGCTGACGCA CGAGTTGCGC GCGGCCAAGA GCTGA
 
Protein sequence
MTISVEKPSS DAQAGGKVPL VELKNVGKSY GNITALKDIC LRVHAGEVTG ILGDNGAGKS 
TLIKIIAGLH QQTEGQLLVD GEPTKFASPA EALGKGIATV YQNLAVVPLM PVWRNFFLGQ
ELRKKSFPFS LDADAMRATT LTELSKMGID LPDVDVPIGS LSGGQKQCVA IARAVFFGAR
VLILDEPTAA LGVKQSGVVL KYITAAKEAG FGVVFITHNP HHAHLVGDHF VLLNRGRQKL
DCTYDDITLE HLTQEMAGGD ELEALTHELR AAKS