Gene Mvan_3938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3938 
Symbol 
ID4646229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand+ 
Start bp4208011 
End bp4208619 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content71% 
IMG OID639807400 
Productcation efflux protein 
Protein accessionYP_954721 
Protein GI120404892 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.954167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGA CCGCGGAGCG CCGCAGCGTT CTGACCCGGC GCATCCGGTT CCTGGTGGCG 
GCGACGATCA CCTACAACGT CATCGAAGCG GTGGTCGCAC TCGCCGAAGG CAGCCGGGTG 
TCGTCGGCGG CGCTGGTCGG GTTCGGGCTC GACTCCGTGG TCGAGGTGTC CTCCGCGGCG 
GCGGTGGCAT GGCAGTTCTC CGCCGTGGAT CCCGAGACCC GCGAGAAGGC CGCCCTGCGG 
TTCATCGCAT TCTCGTTCTT CGCGTTGGCC TGCTATGTCG CCGTCGACGC CGCGCTCTCG 
CTGGTGGGGG TTCGCGAGCC GCGACCCACA CCGATCGGCA TCGTCCTCGC AGGACTGAGC 
CTGGCCGTGA TGCCGACGCT GTCTCTGGCC CAGCGTCGGG CCGGCCGCGA GTTGGGATCG 
CGGTCGGCGG TGGCGGATTC GAAGCAGACG CTGCTGTGCG CCTATCTGTC CGCGGTGCTG 
CTCGTCGGCC TTGTGCTGCA CGCGCTACTG GGTTGGACCT GGGCCGACCC CGTTGCGGCG 
CTGGGCATTG CGGCGCTGGC GGTGCGCGAA GGCCTCGAGG CCTGGCGCGG CGACCCGTGT 
TGCCGCTAG
 
Protein sequence
MALTAERRSV LTRRIRFLVA ATITYNVIEA VVALAEGSRV SSAALVGFGL DSVVEVSSAA 
AVAWQFSAVD PETREKAALR FIAFSFFALA CYVAVDAALS LVGVREPRPT PIGIVLAGLS 
LAVMPTLSLA QRRAGRELGS RSAVADSKQT LLCAYLSAVL LVGLVLHALL GWTWADPVAA 
LGIAALAVRE GLEAWRGDPC CR