| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3871 |
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| Symbol | |
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| ID | 4649188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 4139984 |
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| End bp | 4142725 |
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| Gene Length | 2742 bp |
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| Protein Length | 913 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639807337 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_954658 |
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| Protein GI | 120404829 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.760244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.907756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCTCG GCCGCGAATC CGAGCAGCAG CGCATCGCCG AGCTGGTGGC CGGCGCGCGT
CTCGGCCAGA GCGGGGTGTT GGTCGTCCGC GGGGAGGCCG GAATCGGCAA AACCGCGCTG
CTCGAGGACA CCGCTGCGCA CCTCGGCGAC ATGACGCTGG TCCGCGCCTC CGGAACAGAG
GCCGAGTCGA CCCTCGAATT CTCCGGACTG CATCAGTTGC TGCGGCCCGC ACTGCATCTC
ATCGATCGCC TGCCGGCGCC GCAGTGCGAC GCTCTCGCGG TGGCTCTGCT GATGCGTGAC
GGTCCCGCAC CCGAACGGTT CGCAGTCGGC GCGGCCACGT TGAGCCTGCT CAGCAGGTAT
GCCGAAGACT CTGCGCTGCT GGTGCTGGTG GATGACGCGC ACCTGCTCGA CTCACCGTCG
GCCGACGCGT TGACGTTCGT CGCCCGTCGC CTGCTGGCCG ATCCGATCGC GATGGTGATC
TCGACCCGCC CGGAGCCACA CGCCGCGTTC ACGGCGACCG ACCTCCCGGT ACTGGATCTC
GGCGGCTTGG ATCTTGCCGC GGCGTCGGAG CTGATCTCGC GGTCGGCGCC GAACCCGACG
ACGGCCGAGG ATGCCGAACA CCTTCACCGG GTCACGTTGG GCAGCCCGCT GGCCCTGGTC
GAACTCTCCC GCGACATCGA ACGCGTCCGT GACTCGCCAC CCGTGCTGCC GGTGCCGGTG
TCCGACGCCG TCGCACAGGC CTTCGGGCGA CGGATCACCG CGCTCCCCGA CTCCACGCGG
TTGGCTCTTC TGCTCGCGGT GGTCGCCGAC GGGGATCTCG GGCTGGCGTC TCGCGCTGCC
GCGGAGATGG GTACCTCGCT GGCCCCGATC GTCGAGGCCG AGTCGATCGA GCTGATGCGC
ATCAACGCCG GTCGAGTCGA CTTCCGGCAT CCGTTGGTCA GATCGGCCGT CTACGCCGCC
GCCGATGCGC AGACCCGCCG GGACGTCCAC CGCGCCGTCG CGGCCGCGAT GCCCGCGGCC
GCACACACCC GCCGGGTCTG GCACCTGAGC GAGGCGGTCG TCGGACCCGA CGACGCGGTG
GCCGACGATC TCGTCGATCT GGCCGAAAAG GCCACTGCCC GTGGCGCACA CGGCGTGGCA
GCCAACGCTC TGACCAGAAG TGCAGAGCTG ACCAACGACG ACGTGCTGCG CTGTGCGCGG
TTGATCCGTG CCGGCGAGGC GGCCTGGTTC GCCGGGCACC TCACCCGTGC CCGGGGGCTG
ATCGATGATG CGGAGGCGAT CGCCGCGGGG CCCGACACTC TCACCCAGAT CAGCGCGCTG
CGCGGCCATA TCGCGTTGCG CAGCGGTTCG CTCCGCGACG CTCACGACCT CCTCGTCGAC
GCGGCCGCGA GAACCGATGC GGCAGAAGCG GATGCCACCG TGGGCCTGTT GGCGGACGCG
GTCACCGCAT GCTTCTACAT GTGTGACACC GCCGCGGGCC TGGCCCTGGC CGACCGCATC
GAAGTGCTTC TACCGGCGTG CCGCACGGGC TCGGCACGCA CCCGCGGCCA GCTGGCCATC
GGAGTCGCCC GCGTCATTGC CGGTGGCGAC GGGATGCGGT GGCTGCGGAT CGCCGTCGAG
ACACTCAACA ACGAACCGTC GGTGCTCGAC GACCCCCGCC GCCCGGACTG GTCGATCGTC
GGCGCCCTGT TTCTCCGTGA AACCGCCGCC GGCAGAGATC TCATGCAACG GGTCGTGCAG
GATCGCAGGA AAAGGACGGC GATCGGTGCG CTACCGAATC TGCTGTTCCA CACGGCCCGT
GACGACGCGA CCACCGACAA CTGGCAGTCA GCGCTGGCGA GTTACACCGA AAGCGTCGCG
CTGGCAAGAG AAACCAGTCA AAGCACCGAC CTGGCCGCAT CACTGGCGGG GCTGGCATGG
TTGCAGGCGA GAATGGGCCG CTTTGCCGAG TGTCGCGTCA ATGCCGCCGA GGCACGGCAG
TTGGCGCGGC GCCACCACAT CACGTTCGCC CACCTGTGGG CACAGTTCGC CCTCGGCGAT
TCCGCACTGG CCGAAGGCAA CGCCGGCGAG GCCATCGTGC ACTACCAGGG AATGGAATCA
TTGTTGACCG ACAACAGATT TCGTGACGTC GACCTGGCAC CAGGGCCGGA ACTCGCCGAA
GCACACATGC GGCACGGCGA CGCTGCCGCC GCGCACGAGG TCGCCGTGGG TTACCTGGGC
CGGGCACAGG AGAAGAGTCA GCCGTGGGCG TTGGCGCGCG CGCACCGGGC GATGGCACTC
ACCGCCGGAG AGCCCGGGGT ATGTGAGGCA CACTTCTCGG AAGCTCTACG GCTGCACGAA
CTCAACCCCG ACAGGTTCGA GGCCGCGCGC ACCCGGCTTG CGTTCGGCTC CAGCCTTCGC
CGCATCAAGA AGCGGGTCGC CGCGCGACCG CATCTCCGTG CGGCCCTCGA AGACTTCGAA
CGACTCGGGG CCCGCCCGTG GGCCGACGCC GCCGCAGATG AGCTCGAAGC CACCGGCGAA
CGCGCTCGGC GCGGTGGTAC CGAGTATTCG GCCCTGCTGA CGTCGCAGGA GCTTCGGATC
GCCCAGATGC TCGGCCGGGG AGCCACCACG AAGGAAGCCG CCGCGGCACT GTTCCTGAGC
CCGAAGACGG TCGAGTACCA CCTGCGCAAC GTGTACCACA AGCTCGCGAT CAGCTCGCGG
TCCGAGCTGA AAGCGGTGGT GCAGGACCGG GCGGACGGCT GA
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| Protein sequence | MLLGRESEQQ RIAELVAGAR LGQSGVLVVR GEAGIGKTAL LEDTAAHLGD MTLVRASGTE
AESTLEFSGL HQLLRPALHL IDRLPAPQCD ALAVALLMRD GPAPERFAVG AATLSLLSRY
AEDSALLVLV DDAHLLDSPS ADALTFVARR LLADPIAMVI STRPEPHAAF TATDLPVLDL
GGLDLAAASE LISRSAPNPT TAEDAEHLHR VTLGSPLALV ELSRDIERVR DSPPVLPVPV
SDAVAQAFGR RITALPDSTR LALLLAVVAD GDLGLASRAA AEMGTSLAPI VEAESIELMR
INAGRVDFRH PLVRSAVYAA ADAQTRRDVH RAVAAAMPAA AHTRRVWHLS EAVVGPDDAV
ADDLVDLAEK ATARGAHGVA ANALTRSAEL TNDDVLRCAR LIRAGEAAWF AGHLTRARGL
IDDAEAIAAG PDTLTQISAL RGHIALRSGS LRDAHDLLVD AAARTDAAEA DATVGLLADA
VTACFYMCDT AAGLALADRI EVLLPACRTG SARTRGQLAI GVARVIAGGD GMRWLRIAVE
TLNNEPSVLD DPRRPDWSIV GALFLRETAA GRDLMQRVVQ DRRKRTAIGA LPNLLFHTAR
DDATTDNWQS ALASYTESVA LARETSQSTD LAASLAGLAW LQARMGRFAE CRVNAAEARQ
LARRHHITFA HLWAQFALGD SALAEGNAGE AIVHYQGMES LLTDNRFRDV DLAPGPELAE
AHMRHGDAAA AHEVAVGYLG RAQEKSQPWA LARAHRAMAL TAGEPGVCEA HFSEALRLHE
LNPDRFEAAR TRLAFGSSLR RIKKRVAARP HLRAALEDFE RLGARPWADA AADELEATGE
RARRGGTEYS ALLTSQELRI AQMLGRGATT KEAAAALFLS PKTVEYHLRN VYHKLAISSR
SELKAVVQDR ADG
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