| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3824 |
|---|
| Symbol | |
|---|
| ID | 4645964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 4074822 |
|---|
| End bp | 4076339 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639807290 |
|---|
| Product | amidase |
|---|
| Protein accession | YP_954611 |
|---|
| Protein GI | 120404782 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.315125 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.684244 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACA CCGCTTACTC CCGCATCACC TCCCGACGCC GTTTCCCCAC CCTGGGCAAC
CAGTTGTTCC AGCTCGCCAG TGGCACCGCC ACCTCGGTCG ACCTGGTGAG CCGCTCGCTG
CAGGCCATCG AGGCGAGCCA GCCCACCCTC AACGCGTTCC GGGTGGTGCT GACCGAACAG
GCGCTGGCCG ACGCCGCCGA GGCCGACCGC AAGCGGGCGG CCGGCGCGGA CCTGTCCCGT
CACCCCCTTC TCGGCGTCCC GATCGCGGTG AAGGACGACG TCGACGTCGC CGGCGTGCCG
ACCCGGTTCG GCGCCGACGG CGAGGTCCCG CCCGCCGAGG CCGACGCCGA GGTGGTGCGG
CGGCTGCGCG CGGCGGGCGC GGTCATCGTC GGCAAGACCA ATACGTGCGA GCTGGGTCAG
TGGCCGTTCA CCAGCGGGCC GGCGTTCGGA CACACCCGCA ATCCGTGGTC CCGGGAGCAC
ACTCCGGGCG GGTCGTCGGG CGGCAGCGCC GCGGCGGTTG CGGCCGGACT GGTCGCCGCC
GCCATCGGCT CCGACGGCGC GGGCAGCGTC CGGATCCCCG CGGCGTGGAC GCACCTGGTC
GGCATCAAGC CGCAGCGGGG ACGCATCTCG ACCTGGCCGC TGACCGAGGC GTTCAACGGC
ATCACCGTCC ACGGCGTCCT CGCCCGCACC GTCTCGGACG CGGCGCTGCT TCTCGACGCG
GCATCCGGCA ACGCCCCCGG CGAGTTGCAC ACCCCGCCGC CGGTGCGCGT CTCCGACTAC
GTCTCGCGCG CCCCCGGCCC GCTGCGCATC GCGATGTCGA CGAAGTTCCC GTTCACCGTG
TTCCGGGCCG GCCTGCACCC CGAGATCCGG ACGGCGCTGC AGAACGTCGC CGACCAGCTC
ACCCAGCTCG GGCACACGAT CGTCGCCGCC GACCCCGACT ACCACCTGCG CATGTCGTGG
AACTTTCTGT CCCGCTCCAC CTCGGGCATC CCGGAGTGGA TGGACCGGTT GGGCCGCGGC
GTGAACTGGG ACAGCCGCAC CCGGTCCAAC GCCCGGATGG GTTGGCTGCT GTCACAGAAC
GTGCTGCGCA AGGCGCGCGC CGGCGAGGCA GCCAGCCAGC AGCGGATCGG CTGGATCTTC
AACCTGGCCG ACGTCGTGCT GGCCCCTACC ACCGCCCTGC CGCCACCGGA GGTGCGTGCC
TTCGACGACC TCGGCGGGCT GGCCACCGAC CGGATGATGA TCAAGGCCTG CCCGGTGACC
TGGCCGTGGA ACCTGCTGGG CTGGCCGTCG ATCAACGTGC CCGCCGGGTT CACCTCGGAC
GGCCTGCCGA TCGGCGTGCA GCTGATGGGC CCGGCCAACA GCGAGCCGCT GCTGGTGTCG
CTGGCCGCCG CACTGGAGGC CATCAACGGC TGGGCGGTGC ATCAGCCCGA GGACTGGTGG
ACGCCGCAGC CACCGCCGGA ACCGGATCTG GGCTCGAATG TGGCCGCTCC TGCCTCGGTG
GAGGGCCAGG TCGCGTAA
|
|---|
| Protein sequence | MADTAYSRIT SRRRFPTLGN QLFQLASGTA TSVDLVSRSL QAIEASQPTL NAFRVVLTEQ
ALADAAEADR KRAAGADLSR HPLLGVPIAV KDDVDVAGVP TRFGADGEVP PAEADAEVVR
RLRAAGAVIV GKTNTCELGQ WPFTSGPAFG HTRNPWSREH TPGGSSGGSA AAVAAGLVAA
AIGSDGAGSV RIPAAWTHLV GIKPQRGRIS TWPLTEAFNG ITVHGVLART VSDAALLLDA
ASGNAPGELH TPPPVRVSDY VSRAPGPLRI AMSTKFPFTV FRAGLHPEIR TALQNVADQL
TQLGHTIVAA DPDYHLRMSW NFLSRSTSGI PEWMDRLGRG VNWDSRTRSN ARMGWLLSQN
VLRKARAGEA ASQQRIGWIF NLADVVLAPT TALPPPEVRA FDDLGGLATD RMMIKACPVT
WPWNLLGWPS INVPAGFTSD GLPIGVQLMG PANSEPLLVS LAAALEAING WAVHQPEDWW
TPQPPPEPDL GSNVAAPASV EGQVA
|
|---|
| |