| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3806 |
|---|
| Symbol | |
|---|
| ID | 4645945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 4054071 |
|---|
| End bp | 4056116 |
|---|
| Gene Length | 2046 bp |
|---|
| Protein Length | 681 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639807271 |
|---|
| Product | ABC transporter-related protein |
|---|
| Protein accession | YP_954593 |
|---|
| Protein GI | 120404764 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.279274 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.590434 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCGG CCGGCCCGGA GAGCGCCCCT CGACGGACTG GACCCCTGCA ACCGGTCGAG
CTCGCGCAGG CCGCCGTCAT GGCCGCGTTG TGCGCGGCCA TCGCGATCAT CGCGGTCGTG
GTCCCGTTCG CGGGCAGCCT GTCGTTGCTG GGGACTGTGC CGATGGGGCT GTTGGCCTAC
CGGTACCGGC TGCGGGTGCT GCTCGCCGCC ACCGTGGCCG GCGGTCTGGT GGCCTTCCTC
ATCGCCGGCA TGGGCGGCTT CATGACCGTC GTCAACTGCG CCTACATCGG CGGCCTGACC
GGGATCGTCA AGCGTCGCGG ACGGGGCACG CCCACGGTCG TCGCCTGCGC CCTCGTCGCG
GGCGCCCTGT TCGGTGTCGC CGTGGTGGCC GCCCTCGCCC TGCTGAGCCG GCTGCGCCAC
CTGATCTTCG ACTCGATGAC CGCCAACATC ACCGGACTGG CCGCGATCCT GGAACGGGTG
CCGGGCCTGG AGCCCGTCGC CGAGCGGCTC ACGCGTGACT TCGCGACGGC CCTGCATTAC
TGGCCGTACC TGTTCTTCGC CGTGGGGGTC CTCAGCATCA CATTCGTCAG CCTGGTCGGT
TGGTGGGCGC TGTCGCGGGT GCTGGGCCGC CTGCTCGGCG TTCCCGACGT GCACAAACTG
GAGGCATCGA ACGACGTCGG ATCGATCGCA CCCGTCCCGC TGCAGCTGCG CGACGTGCGC
TTCCGCTATC CGAACGCCGG TCAGGACGCG CTCGGACCGG TCTCGCTGGC CGTGCAACCG
GGTGAACACC TGGCGGTCAC CGGCGCCAAC GGCTCGGGCA AGACCACGCT GATGCTGGTG
CTCTCCGGTC GCGAGGCCAC CGCCGGAACC GTGGAGCGGC CCGGTGCGGT GGGTCTCGGC
AAGATCGGTG GGACCGCGGT CGTCATGCAA CATCCGGAAA GTCAGGTCCT GGGAACGCGT
GTCGCCGACG ACGTGGTGTG GGGGCTACCG CCCGGTGCCT CCATCGACGT GGATCGGCTG
CTCGCCGAAG TGGGGCTCGA CGGCCTCGCC GAACGGGACA CCGGCGGACT GTCCGGCGGC
GAACTGCAGC GGCTGGCCGT GGCCGCGGCG CTCGCCCGCG AACCCTCTCT GCTGATCGCC
GACGAGGTCA CCAGCATGGT CGACCAGGAC GGCCGGGAGG CGTTGATGTC GGTGCTGGCC
GGTCTGACCA CGCGGCACCG CACCGCGCTG GTGCACATCA CGCACTACAA CGACGAGGCC
GAGGCGGCCG ACCGCACCGT GACACTCGTG GGTAACGACG CGGCGTCCGA CAACTCGCAG
ATGGTGGAGA CTGCCGAGGT GCCGTCGGGT ACACCCGACG AGACGCCGCG CGGTGCTCCG
GTCCTGGAAC TGCGCGGCGT CGGCCACGAA TACGGAAGCG GAACCCCCTG GGCCAAGCGG
GCGTTGAGCG GCATCGACTT CACCGTCCAC GAGGGCGACG GCGTGCTGAT CCACGGCCTC
AACGGGTCCG GCAAGTCCAC GCTGGCCTGG ATCATGGCCG GACTGACGGT GCCCACCGTC
GGCGCCTGCC TGCTCGACGG GGAGCCGGTG TCGGAACAGG TCGGCGCCGT GGCCATCTCG
TTCCAGGCGG CTCGGCTGCA GCTGATGCGC AGCCACGTCG CGCACGAAAT CGCCTCTGCG
GCAGGCTTCT CGGTGCGTGA CCGCGACCGG GTCGTCGCAG CGCTGGCGTC CGTCGGCCTG
GACCCCGGCC TGGCCACCCG CAGGATCGAT CAGCTCAGCG GCGGGCAGAT GAGACGCGTC
GTGCTGGCGG GCCTGCTGGC GCGTTCGCCG CGCGTGCTGA TCCTCGACGA GCCGCTGGCC
GGGCTGGATG CCGCCTCACA GCGCGGACTG GTGCATCTGC TGGAAGACCT TCGCCGCCGG
ACCCGTCTGA CCGTCGTCGT CATCTCGCAT GATTTCGGGG GTCTGGAGCG GTTGTGCCCG
CGCACCCTGC ACCTGGAGAA CGGGGTGCTC GCGACCGCAC CCACCGCGGC AGGGGGTCGG
TCATGA
|
|---|
| Protein sequence | MTSAGPESAP RRTGPLQPVE LAQAAVMAAL CAAIAIIAVV VPFAGSLSLL GTVPMGLLAY
RYRLRVLLAA TVAGGLVAFL IAGMGGFMTV VNCAYIGGLT GIVKRRGRGT PTVVACALVA
GALFGVAVVA ALALLSRLRH LIFDSMTANI TGLAAILERV PGLEPVAERL TRDFATALHY
WPYLFFAVGV LSITFVSLVG WWALSRVLGR LLGVPDVHKL EASNDVGSIA PVPLQLRDVR
FRYPNAGQDA LGPVSLAVQP GEHLAVTGAN GSGKTTLMLV LSGREATAGT VERPGAVGLG
KIGGTAVVMQ HPESQVLGTR VADDVVWGLP PGASIDVDRL LAEVGLDGLA ERDTGGLSGG
ELQRLAVAAA LAREPSLLIA DEVTSMVDQD GREALMSVLA GLTTRHRTAL VHITHYNDEA
EAADRTVTLV GNDAASDNSQ MVETAEVPSG TPDETPRGAP VLELRGVGHE YGSGTPWAKR
ALSGIDFTVH EGDGVLIHGL NGSGKSTLAW IMAGLTVPTV GACLLDGEPV SEQVGAVAIS
FQAARLQLMR SHVAHEIASA AGFSVRDRDR VVAALASVGL DPGLATRRID QLSGGQMRRV
VLAGLLARSP RVLILDEPLA GLDAASQRGL VHLLEDLRRR TRLTVVVISH DFGGLERLCP
RTLHLENGVL ATAPTAAGGR S
|
|---|
| |