Gene Mvan_3649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3649 
Symbol 
ID4649340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3881783 
End bp3882553 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content69% 
IMG OID639807120 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_954444 
Protein GI120404615 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.128425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGGG CTGGCGGTGA TACCACCGGT GCACCCCGCT GGGGCGGGAC CGCGCTGCTG 
CGCCCGGGGG TGTTGGCGCT CACCGGATCG ATCGGTACCA CTGATGTTCA CGCCCACCAC
GCCGTCCAAA TCCTGACGGC CACTACACCT TTGACGGTGC GTGACGGGCA CGGCATCGGG
CATCGCGGCA CGAAGGTGGT CGTGCCCGCC GATGCGCCAC ACCGGATCGA GGTCGGCGCG
CAGGAGGGCA CGGTGGTGTT CTTGGAACCG GAGTCCTTGC CGGGGCGGTC GGCACATCTG
CGCGCGGTCC ATTCCGGGTG GACTGTTGCT CCCGTGTTGA CGTCGACGCG ACGACGAACT
CTGGCCGCCG TGGTGGACGA GCTGGTCGAG CACCTGGCGC CCGTCCTGAC CGGAGACGGA
GCAACGCCAC GCCATCCCGC CGTTGATGAC GCGCTACGCC TCCTGCCCAG CCTTGTCGCC
GCAGGCCCCG TCAGCGGTAC GGATCTCGCT GCCCAAGTAG GCCTCTCGGT GAGCAGGTTG
ACGCATCTAT TCACTGATCA GGTCGGCATC CCGCTACGCC GCTACGTGCT GTGGTCGCGG
TTGCGGCTCG CGGTCATGCG GGTGCAGGCC GGTGATGACC TGACCGGCGC CGCGCACGGT
GCGGGGTTCG CTGATAGCGC TCACCTGACC CGCACCACCC GCGAGATGTT CGGCCTGGCG
CCCTCGGTGC TGAGCCGGCA CGTGTCCTGG GACCTCGAAG CCGGCCTTTA G
 
Protein sequence
MTRAGGDTTG APRWGGTALL RPGVLALTGS IGTTDVHAHH AVQILTATTP LTVRDGHGIG 
HRGTKVVVPA DAPHRIEVGA QEGTVVFLEP ESLPGRSAHL RAVHSGWTVA PVLTSTRRRT
LAAVVDELVE HLAPVLTGDG ATPRHPAVDD ALRLLPSLVA AGPVSGTDLA AQVGLSVSRL
THLFTDQVGI PLRRYVLWSR LRLAVMRVQA GDDLTGAAHG AGFADSAHLT RTTREMFGLA
PSVLSRHVSW DLEAGL