Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_3649 |
Symbol | |
ID | 4649340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 3881783 |
End bp | 3882553 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639807120 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_954444 |
Protein GI | 120404615 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.128425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCGGG CTGGCGGTGA TACCACCGGT GCACCCCGCT GGGGCGGGAC CGCGCTGCTG CGCCCGGGGG TGTTGGCGCT CACCGGATCG ATCGGTACCA CTGATGTTCA CGCCCACCAC GCCGTCCAAA TCCTGACGGC CACTACACCT TTGACGGTGC GTGACGGGCA CGGCATCGGG CATCGCGGCA CGAAGGTGGT CGTGCCCGCC GATGCGCCAC ACCGGATCGA GGTCGGCGCG CAGGAGGGCA CGGTGGTGTT CTTGGAACCG GAGTCCTTGC CGGGGCGGTC GGCACATCTG CGCGCGGTCC ATTCCGGGTG GACTGTTGCT CCCGTGTTGA CGTCGACGCG ACGACGAACT CTGGCCGCCG TGGTGGACGA GCTGGTCGAG CACCTGGCGC CCGTCCTGAC CGGAGACGGA GCAACGCCAC GCCATCCCGC CGTTGATGAC GCGCTACGCC TCCTGCCCAG CCTTGTCGCC GCAGGCCCCG TCAGCGGTAC GGATCTCGCT GCCCAAGTAG GCCTCTCGGT GAGCAGGTTG ACGCATCTAT TCACTGATCA GGTCGGCATC CCGCTACGCC GCTACGTGCT GTGGTCGCGG TTGCGGCTCG CGGTCATGCG GGTGCAGGCC GGTGATGACC TGACCGGCGC CGCGCACGGT GCGGGGTTCG CTGATAGCGC TCACCTGACC CGCACCACCC GCGAGATGTT CGGCCTGGCG CCCTCGGTGC TGAGCCGGCA CGTGTCCTGG GACCTCGAAG CCGGCCTTTA G
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Protein sequence | MTRAGGDTTG APRWGGTALL RPGVLALTGS IGTTDVHAHH AVQILTATTP LTVRDGHGIG HRGTKVVVPA DAPHRIEVGA QEGTVVFLEP ESLPGRSAHL RAVHSGWTVA PVLTSTRRRT LAAVVDELVE HLAPVLTGDG ATPRHPAVDD ALRLLPSLVA AGPVSGTDLA AQVGLSVSRL THLFTDQVGI PLRRYVLWSR LRLAVMRVQA GDDLTGAAHG AGFADSAHLT RTTREMFGLA PSVLSRHVSW DLEAGL
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