Gene Mvan_3507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3507 
Symbol 
ID4649197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3732269 
End bp3733147 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content68% 
IMG OID639806984 
ProductMerR family transcriptional regulator 
Protein accessionYP_954308 
Protein GI120404479 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0789] Predicted transcriptional regulators
[COG4978] Transcriptional regulator, effector-binding domain/component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.401792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0867153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGCGA TCTGCGATAG TGCAGGGGTG AAACGAGAAG CCGTCCAGGC ATCTCCGAAG 
CTGACCATCG GCGAGTTCGC CACGGTGACC CACCTGAGCG TGCGCACGCT GCGCCGATAT
CACGAGGGCG GACTCCTGGA GCCTGCCTGG GTCGACGGGT ACACCGGTTA CCGGTACTAC
ACGCCCGAAC AGATACCCAC CGCGCAGGTC ATCCATCGGC TCCGGCAACT CGACGTCCCG
CTGGCCGACA TCGAATCCAT CCTCACCGCA GACGATCCGC AGCACCGAGC CCAGGTGATC
TCGGACCATC TGCGTCGCCT GGAGGCCGAA CTCGACCGGA CCCGCGCCGC GGTCGTCTCG
CTGCACAGAC TGCTGAACCC CGAACCCGCC GACCTCGAGG TCCAGCTCCT GTCGGTGCCG
GCCCGCACCG TCGCCGGGAT CAGTGGCCAT GTCCGCCAAG AGGATTCGCT GACGTGGTAT
GACTCGGCGA TGGCCGAACT CGACGCCGCC TTCCCGCCCG CCGAGCACAC GGGACCACCC
GGCGGTCGTT ATGACAACGA GCTTTTCACC CACGGCGCGG GCGCGTTCGC CGTCTTCCGG
CCGGTCCGGA ATCCGAAGCC CGCCGGCAGA ATCCGCGTTC TCGAGCTGCC GCAGGCCGAC
CTGGCCGTCA CCGTGCACAC CGGCAGGCAC GACGACATCG ACGTCACCTA CGGCCGTCTC
GGCAGTTGGG TCGTCACACA CGCCCTGGCA GTCGACGGTC CGATCCACGA GACCTATTCG
GTGGGTCCGC GGGACACCAC GGACCCTGCC GAGTGGCGGA CCGAGATCGG TTGGCCCGTC
TTCCGCCTCG CCGCCGGCGA GCCGTCCGCG CAGAAGTGA
 
Protein sequence
MAAICDSAGV KREAVQASPK LTIGEFATVT HLSVRTLRRY HEGGLLEPAW VDGYTGYRYY 
TPEQIPTAQV IHRLRQLDVP LADIESILTA DDPQHRAQVI SDHLRRLEAE LDRTRAAVVS
LHRLLNPEPA DLEVQLLSVP ARTVAGISGH VRQEDSLTWY DSAMAELDAA FPPAEHTGPP
GGRYDNELFT HGAGAFAVFR PVRNPKPAGR IRVLELPQAD LAVTVHTGRH DDIDVTYGRL
GSWVVTHALA VDGPIHETYS VGPRDTTDPA EWRTEIGWPV FRLAAGEPSA QK