| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3505 |
|---|
| Symbol | |
|---|
| ID | 4649321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 3723963 |
|---|
| End bp | 3730880 |
|---|
| Gene Length | 6918 bp |
|---|
| Protein Length | 2305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639806982 |
|---|
| Product | chitinase, cellulase |
|---|
| Protein accession | YP_954306 |
|---|
| Protein GI | 120404477 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2730] Endoglucanase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0820772 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTACG GACGATTTGT TGGTCGTGTC GGTGCATTAG CTGTGGCGCT GGGCATCGGG
CTCGCGGTCC CCGCCGTGGC GGCCGCCGAC CCGACCGACG ACAGCACCGC AGGCGAGTCG
AGCGCGAAGG CTGACCAGTC CGACGCCGCC GGCGTCGGCA GTCAAGACCC GGGGGATACC
TCGTCGGAGA CCGACGACGT GGGCTCGGAG GATGCAGACT CCGACGATCC CGACGCCGAG
GAATCTGACG ACCTGGCGGA GCACGGTTCG CCCGAGGGAG ACGACGAGGA CACCGCGACT
CCGCCGGGAG AAGTAGCGGC CGAGCCGCCT GCAGACGATG CGACGCCGGC TGCCGAACCG
AACGATGAGT CGCAGCAGGC CGATCGCCAC CAGGCGCACT CGCCCGTCGA CGAGGAAACC
GACGGGGACG CCGACCCGGA AGCCGACGGT CTCGACACCG GCCCCGAGCC CACGGACGCG
CCGGCCGGCC ACCGCGGTGC CGACGAGGCC GTCACGCCGG ATGCTGCCCC ACCGGCAGTC
GAGCCCGCCA CCCCGACGAT GGCCGTGTCG GTCTCGTCTG CAGCAGCCGA GACCGACACC
GCGACCGCGT CCACCGGGCT GGCGAGCATC GTCTCGAAGT TCCTGGGTGT GCTGGGAATC
GGTCCGTCCG CGGCCAACGG CGCCGTGCCG TTGCCGGCGT TCGAGTTCGT CACCGCGGTG
TTCGGCGCGA TCCGCCGCGA GATGGACCGA CTCTTCGCCA ACCACGGGCC GACCGCCGCG
CTCGCGTGGT CCAGCCAGCC GGCGCCCGGC CTGATCACCG GAACGCTGAC CGCCTCCGAT
CCGGAAGGTG ACCGACTGGT CTACACGGTG GTGCAGGCGC CGACCAAGGG CACCGTGACC
GTCGACGCCT CAGGCAACTT CACCTACACG GTCAACCCGC TGCTGGCTTC GGCCGCCGGC
ACCGACAGCT TCGTCATTCA GGTTCGCGAC GCCGGATTCC ACCTGATCTC GGTGAGTCCC
ACCAAGACTC GGGTCCCCGT GGCGATCACC GTGGACTCCG GCGGCGTGGT CACCAAGACG
ACGTCTGCGC GCAGCGGCGC CACCGCACTC GCGGCCACCA GCGCCGCGAC GGGCACGATC
CACCACGTCG TCACATCCGG GCCCGACATC GTCGGATTCG ATCCTGCCAG AGACAAATTG
GATCTCGGCG ATGTGTCGGT GCACAACTTC ATCGTCGTCG ACACGGCCGA GGGGGTCGGC
TTCCGCAACC CCTGGTCCGG CGAGACCGCT GTCGTCAAGG GTGTGTCTCT GAGCCAGCTC
ACCGTCGACA GCTTCACTCC GGTCATCAAC GATCATCTCC GCCAGGACCT TTCCGGCGCG
CTCGCCTGGG AGAGTGGTGT CACCCCGCAG CCCGACACCG TCTATGCACG GTCCCACGAA
GTCGGACAGA TCGACAGGGT GGCCTTCGAT GCGGCCACCG ATGTGGTCGA CTTCCGCTAT
TTCGGCACCC GCGAACAGGT GTACATGTCC GACACCCCCG AGGGCGTGGT GATCTCCAAC
GCCGGCACCG GTCAGGCCCT GATCCTGCAA GGTGTCACCA AGAGCCAGCT CACCGCGAGC
AATTTCATCT TCCACAATGC CCAGGTGCGC GAAGACCGGC TCAACCAGCA GCTGGGTATC
GGAGCGGTGT CGGACTCGCA GATCCTGCCC CAGGGTGTTC CGGTGGCGGG TACCGACAGC
TGGCCCACCG CCGCGGGTGA CGGCCAGCCG CCCGCCGGCG AAACCGGCAC CACCACAACG
ATTTCCTGGC AGTACGGACG TCACGCCACG CTCGACTTCG ACCCGTCCAC GGATAAGCTC
GACTTCGGCT GGTTCAAGGC CCACGAGTTC GACGTCACCG AGGTCGCCGG CTCCACCCGC
ATCGCGATCA CCGGAAACAA CCAGTCGTAC ACCCTCACCG GTGTGGCCAT CGGCGAGCTG
CAGACGAGCA ACATCGTCGC GCTCGACGAC GGTGCGCGGA CCAAGTGGAG CAACCTCATC
TACAGTGCGG GGCAGTCTGT TTCGCAGCCG AGCCTGTCGG TCAGCGACGG CAGCGTGTCC
GAGGGGAACT CCGGGACGTC GACGGTGAAC TTCACCGTCA CGCTGTCGAA GGCGTCCACC
GAGACGGTCA CGGTCAGCTA CAGCACGAGC AACGGCACCG CCACCGCGGC AGGCGGCGAC
TATGCCCCGG CGGTCGGCAC GCTCACGTTC GCGCCCGGAC AGACGACCAA GGCCGTCACG
GTCACGGTCA ACGGCGACAC CCTCGTCGAA CTCGACGAGC AGTTCACGCT GACGCTGTCC
TCCCCGCTGA ACGCGACCAT CGCCGACGGC AGCGGAGTCG GCACCATCCG CAACGACGAC
ATCGACCAGG CGCCTGCCAC GCCGCCGACC GTTTCCATCG CCGACCTGTC CGTCACCGAA
GGCAACGGCG ATCACAGCCA TTTCATGTTC GTCGCGACCC TGAACAAGGC GTCGACGGAG
ACGGTGACCG TCAGCTACGC CACCTCCAAC GGCACCGCGA TCGCCGGCCT CGACTACAGC
GCGACCTCGG GCACCATCAC CTTTGCACCC GGCGTGACCT CGCAACTGGT ACACGTCGAC
GTCGTGGGGG ATGCGCTCGC CGAGACGAGC GAGACGTTCC TCGTCACGCT GTCGAGCCCG
ACAGCCGCCA CCATCGGTGA CGGTTCGGCG ACCGGGACGA TCCTCGACGA CGACACCGTG
GTGCCCGGCA CCGGCGGCGT CAACTCCGGT AACCCCGGCG ACGCCCTCTG GGGCGAGGCG
TATTTCGCGC CCTACGTCGA CATGGGTGCG TGGCCGGTGC CGGATCTGCT GGCCATCGCC
CGGAATTACG GCACGTCGCT GATCACCCTC GGTTTCCTGC AGGCGACGCC GGACGGCAAG
CTGGCGTGGG CCGGGCTGTC GGCGCTGACC CCGGACTCCG ACTTCGACCA GGCCAAGGCG
ATCAACCAGT CGATCGCGGC GCTGCAGGCC GCAGGCGGCG ACGTGATGAT CTCCCTGGGC
GGGGCGTCGG GAACCAGCCT GGCGCAGTGG TACGTCACCC GTGGGCTCAG CGCGCAGGCA
CTGGCAACCG CATACGCCGG CATCGTCGAC ACCTACCACC TCAACCGCAT CGACTTCGAC
ATCGAAGGTG CCGCGGTGGC CGACCAGGCG TCGATCGCGC TGAACGCCCA GGCGCTGAAA
CTGCTGCAAC AGCAGAAGCC CGACCTGGAG ATCTGGTACA CCCTGCCGGT GCTGCCCACC
GGCTTGACGG CCGACGGCCT CAACGTCGTG CGCGCCGCGC TGACGACGGG TGTCAAGCTC
GACGGCGTCA ACGTGATGGC GATGGACTAC GGCGAGTCGG CTGCGCCCAC CAGCGGGCCG
AACGCAAAGA CCATGGGCGC CTACGCCATC CAGGCCGCGG AGTCGACCCA CGCGCAGCTC
TCCGCGCTCT ACACCCAGCA TGGGCAGAGC TTCGGCTGGA ACCAGCTCGG CGTCACCCCG
ATGATCGGCG TCAACGACGT TCTGACCGAG GTGTTCACCG TCGCCGATGC GCAGGCACTC
GAAGACTTCG CCCGCGCAAA GGATCTCGGC ATGCTGTCGA TGTGGTCGGT GAACCGCGAC
AAACCGGGCA ATCTCGGCCA GGCCACCACC AACACCTCCG GGACCAACGC CCCCGAGGGC
AGCTTCAGCA ACGTCTTCAA CGACTACGGA ACTGTCAATC CGGTGTCCGG ACCGCCGCCG
GTGATCTCCA TCGCCGACCT CGCGGTGGCC GAAGGCAACG GCGATCACGC CCATTTCATG
TTCGTCGTGA CCCTGGACAG GGCGTCCACC GAGGCGGTCA CGGTGCACTA CACCACAGCC
AACGGCACCG CGACCGCCGG CGTGGACTAC ACCGCAGCCT CGGGCGTCAT CGAGTTCGCG
CCGGGCGTCA CGTCGCGCAC CGTGCACGTC GACATCCTCG GCGACACCCT TGCCGAATCG
AGCGAGACGC TCACCGTGAC GCTGTCGAGT CCGACCGGTG CGACCATCGC CGACGGCACC
GCCACCGGCA CCATCACCGA CGACGACGGT GGTACCACCC CGACCCCGGT TGACTCGTCG
GTGAAGTACG TCGTCAACGA CAACTGGGGA TCCGGCTTCG TTGCGACGGT CATCGTGACC
GCGGGGACGT CCGGATTCTC AGGCTGGACA GTGGAATTCG ATTCGCCGGC ACAGATCAGC
AACATCTGGA ACGCGGAGAT CGTCAGCCAG GTGGGCAACC ACTACGTGGT GCGCAACGTC
TCGTGGAACC CCAAGGTCGT CGCCGGGCAG ACCGTCGAGT TCGGCTTCCA GGCGTCCCCT
GGCGGCGCCA CGGCGACGGC CACCGGCTTC GTCGTCAACG GCGTGCCCGC CGGTGGTCAG
GGTCCGGCCC CGGTGGTGTT GCCGAAGGTC GCGATCGCCG ACGCCAGTGT CACCGAATCC
GACAGCGGCA CAAAGAACAT GGTGTTCGTG GTGACGTTGG ACAAGGCGCC GGCGACGCCG
GTGAGCATCG CCTATGCGAC GTCGAACGGC ACCGCGACCG CCGGAAGTGA CTTCACCGCG
ACCTCGGGTG TTCTGACCTT CGCCGCCGGT GCGACCACCG CGCAGATCAC GGTCCCGATC
CTGGGCGACA CGGTCGTCGA ACAGAACGAG ACGTTCACGC TGACCCTTTC GAATCCGAAC
GGGGTGACCA TCGCCGACGC TTCCGCGGTC GGCACCGTCA CCAACGACGA CGTGGCCACC
CCCACGCCGG GCAATTCGTC GGCCACGTTG GCGGTCAACG ACAATTGGGG CTCCGGCTTC
ACCGCTACCG TCACCGTGAC AGCCGGGTCT GCCGGACTCA ACGGCTGGAC AGTCGAATTC
GACACCCCTG CGCAGATCAG CAACATCTGG AACGCCGAGA TCGTGAGCAG GGTCGGCAAC
CACTACGTGG TGCGCAACGC CTCCTGGAAC CCCAAGGTCG CGGCGAACCA GACCGTCAGC
TTCGGCTTTC AGGCATCTCC AGGAGGTGCT TCGGCGACGG CCACCAACTT CGTCGTCAAC
GGACAGGCGT CGGCCCCTGT GCAGCCGACG GTGTCGGTCG CCGATGCCGC AGTCAACGAA
GCACACAGCG GCGCAACGCA GATGACGTTC GTGGTGACAC TGTCGAAGGC GTCGACCACG
CCGGTAACCG TCACCTACGC GACCGGCAAC GGTACGGCCA CCGCCGGCGT GGACTACACC
GCGAAGTCGG GGACGGTGAC CTTCGCCCCG GGAGTGCTCT CGCAGCAGAT CCAGGTCTCC
ATCACCGGTG ACACCGCGGT CGAGGCGAAC GAGACCTTCA CGCTGACACT CTCGAACCCC
AGCGGCGCGA CCGTGTCCGA CGGCTCCGCC ACCGGGACAA TCACCAACGA CGACGTCGCG
GTGCCCGGCA ACGTGTCGCT GAGCATCTCG GATGCCTCGG TGACCGAAGG CGTGCCCGGC
ACCGGGGTCG CGGCCGGCTG GTTCAAGACC GCCGGCAACC AGATCGTCGA TTCGGCGGGC
AACCCGGTAC AGATCGCCGG CGTCAACTGG TTCGGCATGG AGAGTGACAT ATTCACGCCG
CACGGCCTGT GGACGCGCAA CTACAAAGAC ATGATGAACC AGATGGCGGC GCTGGACTTC
AACACCATCC GGCTCGCGTA CTCCAGCGAG AGCCTGCACA CCACCAAGGC GCCGTCCGGC
ATCGACTTCT CGAAGAATCC CGACCTGGTC GGGCTCAGCT CGCTGCAGAT CATGGACAAG
ATCGTCGCGT ACGCCGGCGA AATCGGGATG CGTGTCATCC TGGACCACCA TCGCAGCAGT
GCAGGAGCGG GCCCGAACGG CAACGGCCTC TGGTACGAGG GCTCCTACAC CGAGGCGGCG
TGGATCGCCG ACTGGAAGAT GCTGGCGCAG CGGTATGCCA ACGATCCGAC GGTGATCGGT
GCCGACCTGC ACAACGAACC GCACAATGGA ACCTGGGGCG GTGGGGGAGC CACCGACTGG
GCCGCCGCTG CCGAGCGGGC GGGCAACGCC GTGCTCTCGG TGAACTCGAA CTGGCTGATC
TTCGTGGAGG GCGTGGAAAC CTATCAGGGC AACAACTACT GGTGGGGTGG CAACCTGATG
GGTGTCAAGG ACCGCCCGAT CGTGTTGAAC GTGCCCGACC GGGTGGTGTA CTCACCGCAC
GACTACCCGA ACTCGGTGTA CAACCAGCCG TGGTTCCAGA CCGCCAACTT CGGTGCGGCG
CTGCCGGACA AGTTCGAGCA GATGTGGGGC TACATCTACG AGCAGAACAT CGCACCGATC
TACCTCGGCG AGTTCGGCAC CAGGATGACC GACCCGAAGG ACCTCGTCTG GTACGAGGCG
ATCACGTCGT ATCTGTCCGG CGACTTCGAC AACAACGGCA CCATCGACAT CGCGGCCGGC
ACCGAGGACA TGTCGTGGAC GTTCTGGTCG TGGAACCCGA ATTCCACTGA CACCGGCGGG
ATCCTGGCCG ACGACTGGAA CACGGTCAAC ACGAACAAGA TGGCCTACCT GCAGGCCATC
CAGTTCGACT TCGACGAAGG CAGCCCCGGT GTGCTGGCGC AGTTCGTGGT GTCGCTGGCC
GCCCCGTCGA CCCAGGCCGT GACGGTCCAG TACGCGACGT CGAACGGCAC CGCCACCGGG
GGCAGCGACT TCGCTGCCAC CTCGGGCACG CTGACATTCC AGCCCGGGGA GACCAGCAAG
ACGATCACCG TGGTGGTGTT CGGGGACACC CTGATGGAAG GCAACGAGAG CTTCGTCGTC
ACACTGTCCA GTCCGGCCGG GGCGACGATC GCCGACCCGA CCGGTGCCGG CACCATCGTC
GACCGGGTGA TCGTCTAG
|
|---|
| Protein sequence | MGYGRFVGRV GALAVALGIG LAVPAVAAAD PTDDSTAGES SAKADQSDAA GVGSQDPGDT
SSETDDVGSE DADSDDPDAE ESDDLAEHGS PEGDDEDTAT PPGEVAAEPP ADDATPAAEP
NDESQQADRH QAHSPVDEET DGDADPEADG LDTGPEPTDA PAGHRGADEA VTPDAAPPAV
EPATPTMAVS VSSAAAETDT ATASTGLASI VSKFLGVLGI GPSAANGAVP LPAFEFVTAV
FGAIRREMDR LFANHGPTAA LAWSSQPAPG LITGTLTASD PEGDRLVYTV VQAPTKGTVT
VDASGNFTYT VNPLLASAAG TDSFVIQVRD AGFHLISVSP TKTRVPVAIT VDSGGVVTKT
TSARSGATAL AATSAATGTI HHVVTSGPDI VGFDPARDKL DLGDVSVHNF IVVDTAEGVG
FRNPWSGETA VVKGVSLSQL TVDSFTPVIN DHLRQDLSGA LAWESGVTPQ PDTVYARSHE
VGQIDRVAFD AATDVVDFRY FGTREQVYMS DTPEGVVISN AGTGQALILQ GVTKSQLTAS
NFIFHNAQVR EDRLNQQLGI GAVSDSQILP QGVPVAGTDS WPTAAGDGQP PAGETGTTTT
ISWQYGRHAT LDFDPSTDKL DFGWFKAHEF DVTEVAGSTR IAITGNNQSY TLTGVAIGEL
QTSNIVALDD GARTKWSNLI YSAGQSVSQP SLSVSDGSVS EGNSGTSTVN FTVTLSKAST
ETVTVSYSTS NGTATAAGGD YAPAVGTLTF APGQTTKAVT VTVNGDTLVE LDEQFTLTLS
SPLNATIADG SGVGTIRNDD IDQAPATPPT VSIADLSVTE GNGDHSHFMF VATLNKASTE
TVTVSYATSN GTAIAGLDYS ATSGTITFAP GVTSQLVHVD VVGDALAETS ETFLVTLSSP
TAATIGDGSA TGTILDDDTV VPGTGGVNSG NPGDALWGEA YFAPYVDMGA WPVPDLLAIA
RNYGTSLITL GFLQATPDGK LAWAGLSALT PDSDFDQAKA INQSIAALQA AGGDVMISLG
GASGTSLAQW YVTRGLSAQA LATAYAGIVD TYHLNRIDFD IEGAAVADQA SIALNAQALK
LLQQQKPDLE IWYTLPVLPT GLTADGLNVV RAALTTGVKL DGVNVMAMDY GESAAPTSGP
NAKTMGAYAI QAAESTHAQL SALYTQHGQS FGWNQLGVTP MIGVNDVLTE VFTVADAQAL
EDFARAKDLG MLSMWSVNRD KPGNLGQATT NTSGTNAPEG SFSNVFNDYG TVNPVSGPPP
VISIADLAVA EGNGDHAHFM FVVTLDRAST EAVTVHYTTA NGTATAGVDY TAASGVIEFA
PGVTSRTVHV DILGDTLAES SETLTVTLSS PTGATIADGT ATGTITDDDG GTTPTPVDSS
VKYVVNDNWG SGFVATVIVT AGTSGFSGWT VEFDSPAQIS NIWNAEIVSQ VGNHYVVRNV
SWNPKVVAGQ TVEFGFQASP GGATATATGF VVNGVPAGGQ GPAPVVLPKV AIADASVTES
DSGTKNMVFV VTLDKAPATP VSIAYATSNG TATAGSDFTA TSGVLTFAAG ATTAQITVPI
LGDTVVEQNE TFTLTLSNPN GVTIADASAV GTVTNDDVAT PTPGNSSATL AVNDNWGSGF
TATVTVTAGS AGLNGWTVEF DTPAQISNIW NAEIVSRVGN HYVVRNASWN PKVAANQTVS
FGFQASPGGA SATATNFVVN GQASAPVQPT VSVADAAVNE AHSGATQMTF VVTLSKASTT
PVTVTYATGN GTATAGVDYT AKSGTVTFAP GVLSQQIQVS ITGDTAVEAN ETFTLTLSNP
SGATVSDGSA TGTITNDDVA VPGNVSLSIS DASVTEGVPG TGVAAGWFKT AGNQIVDSAG
NPVQIAGVNW FGMESDIFTP HGLWTRNYKD MMNQMAALDF NTIRLAYSSE SLHTTKAPSG
IDFSKNPDLV GLSSLQIMDK IVAYAGEIGM RVILDHHRSS AGAGPNGNGL WYEGSYTEAA
WIADWKMLAQ RYANDPTVIG ADLHNEPHNG TWGGGGATDW AAAAERAGNA VLSVNSNWLI
FVEGVETYQG NNYWWGGNLM GVKDRPIVLN VPDRVVYSPH DYPNSVYNQP WFQTANFGAA
LPDKFEQMWG YIYEQNIAPI YLGEFGTRMT DPKDLVWYEA ITSYLSGDFD NNGTIDIAAG
TEDMSWTFWS WNPNSTDTGG ILADDWNTVN TNKMAYLQAI QFDFDEGSPG VLAQFVVSLA
APSTQAVTVQ YATSNGTATG GSDFAATSGT LTFQPGETSK TITVVVFGDT LMEGNESFVV
TLSSPAGATI ADPTGAGTIV DRVIV
|
|---|
| |