Gene Mvan_3340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3340 
Symbol 
ID4644386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3557309 
End bp3557986 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content68% 
IMG OID639806817 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_954143 
Protein GI120404314 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.154999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.696965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTCG TCGACGACAA CTACACGGGC CACGTCGAGC CCCGCACGGC GGCGCGACGC 
ATTCTCCCCG GCGCGTCGAT CGTGAAGGTG TCGGTGGGCC CCATGGACAA CGACGCCTAC
CTCGTCACCT GTTCCCGGAC CGGCGAAACG CTACTCATCG ACGCCGCCAA CGACTCCGCC
GTCCTGCTCG AGCTGATCGA GCGGTACGCC CCGAAGCTGT CCCTGATCGT CACCAGCCAT
CAGCACCAGG ACCACTGGCT GGCGTTGGAG GACGTGGTGG CCGCCACCGG CGCGCCGACC
GCGGCCCACA GCCTGGATGC CGGGCCGCTG CCGGTGACAC CGGACCGACT GCTCGCCGAC
GGTGACACCG TCACGATCGG GGACTTGAAC TTCGACGTCA TCCACCTGCG TGGACACACC
CCCGGCTCGG TCGCGCTGGC ACTGAGCGGG CCGGCCACCG ACGGCCGGGT GCATTTGTTC
ACCGGCGACT GCCTGTTCCC CGGCGGCGTC GGCAAGACCT GGAGAGAAGG CGACTTCGAA
CAGCTGCTCG GTGATGTCAC CAGCCGCGTG TTCGACGTCT TCGGTGATGA CACCGTCGTG
TATCCAGGAC ACGGCGACGA CACGACGCTC GGGACCGAGC GCCCACATCT CGGCGAATGG
CACGAGCGCG GTTGGTGA
 
Protein sequence
MTVVDDNYTG HVEPRTAARR ILPGASIVKV SVGPMDNDAY LVTCSRTGET LLIDAANDSA 
VLLELIERYA PKLSLIVTSH QHQDHWLALE DVVAATGAPT AAHSLDAGPL PVTPDRLLAD
GDTVTIGDLN FDVIHLRGHT PGSVALALSG PATDGRVHLF TGDCLFPGGV GKTWREGDFE
QLLGDVTSRV FDVFGDDTVV YPGHGDDTTL GTERPHLGEW HERGW