Gene Mvan_3288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3288 
Symbol 
ID4644868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3495289 
End bp3497064 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content71% 
IMG OID639806763 
ProductDNA repair protein RecN 
Protein accessionYP_954092 
Protein GI120404263 
COG category[L] Replication, recombination and repair 
COG ID[COG0497] ATPase involved in DNA repair 
TIGRFAM ID[TIGR00634] DNA repair protein RecN 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTAGCCG AGATCCGAAT CGAGGCGCTG GGTGCCATCA GTGCCGCGAC CGCTGAATTC 
GACGGTGGGC TGACCGTGCT GACCGGCGAG ACCGGTGCCG GTAAGACCAT GGTGGTCACC
GGGCTGCACC TTCTCGGCGG GGCACGTGCC GACGCGACCA AGGTGCGTTC GGGTGCTGAT
CGCGCCGTCG TCGAAGGCCG TTTCACCACA GCCGAAGTCG GCGATGCGGT GGCTGCACAG
GTGGACGGCA TCCTGGATTC CTCGGGTGCC GAGCGTGACG ACGACGGCAG TGTGATCGCC
GCCCGCTCCG TCAGCCGCGA CGGGCCCTCG CGGGCCTACC TCGGCGGCCG CAGCGTGCCG
GCCAAGTCGC TGAGCGGCTT CACCAACGAG CTGCTCACGC TGCACGGGCA GAACGACCAG
CTGCGGCTGA TGCGGCCCGA CGAGCAGCGC GCGGCCCTGG ACCGGTACGC CGACGTGGCC
ACCCAGCTCC ACCGCTACCG CACCGCGCGT GACTCCTGGT TGGAGGCGAA ACGGGATCTG
GACGACCGGC GGCGCCGCGC CCGGGAGATG GCTCAGGAAG CCGACCGCCT GCAGTTCGCG
CTCAACGAGA TCGACGTGAT CGACCCGCAT TCCGGCGAGG ACGACGCCCT GGTCGCCGAG
ATCCGCAGGC TGTCCGAGCT CGACGCGCTG CGTGAGGCCG TGCAGACGGC CAGAGCCGCG
CTGTCCGGTG AGAGCGACGA CGGGTTCTCC GCCGCCCACG CGGTCGGCCA GGCCCGCTCG
GCGCTGGAGG GCACCGATGA CGCGCCACTC AAGGCGCTGG CCGAACAGCT GGGCTCGGCG
TTGACCGTGC TCGTCGACGT GTCCGCCGAG CTGGGTGGCT ATCTCGATGA ATTGCCCACC
GACACAAGCA GTTTGGAAAC GAAGCTGGCC CGCCAAGCCG AGCTTCGGAC GCTGACCCGC
AAGTACGCCG CCGACGTCGA CGGGGTGCTG GCGTGGGCCG GCGAGGCCCG CGACCGGCTG
GCTGCGCTCG ACGTGTCCGA GGAGACGCTC GCGGGTCTGG AACGGCGGGT GGAGGAGCTG
CAGGCCACGG TGGTGGCCGC GGCGCAGGAT CTGACCAAGG TGCGGGTCAA AGCGGCCAAG
GGCCTGTCCA AGGCCGTCAC CGCCGAACTG TCCGGGCTGG CGATGGCCGG CGCCGACTTC
GCCATCTCGG TGACCCCGCT GCCGGCCCGC GCCGACGACA GTGCGCCACT GGCCCTGCCG
TCGGGCGTCA CCGTGCACGC CGGCCACGAC GGCGTCGACG CCGTGGAGTT CGGCTTCGCC
GCCCACGGCG GTTCGGATCT GCTGCCACTG AACAAAAGCG CCTCCGGCGG TGAACTCTCC
CGGGTGATGC TGGCGCTGGA GGTGGTGCTT TCCGCCTCGA CGGAAGGCAC GACGATGGTG
TTCGACGAGG TCGACGCCGG CGTCGGAGGA CGTGCGGCGG TGCAGATCGG TCGCCGCCTC
GCTCGACTGG CACGCACCCA TCAGGTCATC GTCGTCACCC ACCTGCCGCA GGTCGCGGCC
TACGCCGACG TGCACCTCGT CGTCGAGGGG GTCGCCGGAC GCGACGACGG CAGGAAGGCG
CGGGCGAAGT CCAGCGGCGT GCGTCGCCTC GACGACGACG ACCGGGTCGC GGAACTGGCG
CGCATGCTGG CCGGGCTGGG GGAGTCCGAC AGCGGCCGTG CCCATGCGCG GGAACTGCTG
GACGCAGCCC GTGCCGAGCG GGCCGCCGCC GACTGA
 
Protein sequence
MLAEIRIEAL GAISAATAEF DGGLTVLTGE TGAGKTMVVT GLHLLGGARA DATKVRSGAD 
RAVVEGRFTT AEVGDAVAAQ VDGILDSSGA ERDDDGSVIA ARSVSRDGPS RAYLGGRSVP
AKSLSGFTNE LLTLHGQNDQ LRLMRPDEQR AALDRYADVA TQLHRYRTAR DSWLEAKRDL
DDRRRRAREM AQEADRLQFA LNEIDVIDPH SGEDDALVAE IRRLSELDAL REAVQTARAA
LSGESDDGFS AAHAVGQARS ALEGTDDAPL KALAEQLGSA LTVLVDVSAE LGGYLDELPT
DTSSLETKLA RQAELRTLTR KYAADVDGVL AWAGEARDRL AALDVSEETL AGLERRVEEL
QATVVAAAQD LTKVRVKAAK GLSKAVTAEL SGLAMAGADF AISVTPLPAR ADDSAPLALP
SGVTVHAGHD GVDAVEFGFA AHGGSDLLPL NKSASGGELS RVMLALEVVL SASTEGTTMV
FDEVDAGVGG RAAVQIGRRL ARLARTHQVI VVTHLPQVAA YADVHLVVEG VAGRDDGRKA
RAKSSGVRRL DDDDRVAELA RMLAGLGESD SGRAHARELL DAARAERAAA D