Gene Mvan_3277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3277 
Symbol 
ID4644494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3485293 
End bp3486018 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content69% 
IMG OID639806752 
Productputative transcriptional regulator 
Protein accessionYP_954081 
Protein GI120404252 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.391011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACG ACACATCGAC CGATACTGAG CTCGAGTCCG CCATCGAGGA CGGCGAGCTC 
GAGGAGGTCA CCGAATCCGA GCTGGACTCC GCGCTTGAGG ATGGCGAGCT CGACTCCGCG
CTCGAGGCGC TGCTGCTGGT GGTCGACACC CCGGTGACCG TCGACGCACT GGCCGCCGCC
ACCGATCAGC CGCCGGCACG GGTGGCTGAA CGGCTGCACC TGCTCGCCGC CGGTCTGGCC
GCCCGCGACA GCGGAATCGA TCTGCGCGAA GCCGCGGGCG GATGGCGGAT GTACACGCGC
TCGAAATACG CCCCCTTCGT CGAGAAGCTG CTGCTCGACG GCGCCCGGTC GAAGCTGACC
CGCGCGGCGC TGGAAACCCT GGCCGTCATC GCCTACCGGC AACCGGTCAC CCGGGCACGT
GTCAGCGCGG TCCGCGGCGT GAACGTCGAC GCGGTGATCC GCACGCTGCT CGCCCGCGGG
CTGATCACCG AAGCCGGCAC CGACTCCGAC TCCGGGGCGG TGACCTTCTC GACCACCGAG
TTGTTCCTCG AGCGGCTCGG ATTGACCTCG CTGACCGACC TTCCGGACAT CGCGCCGCTG
CTGCCCAACG TCGACGTCAT CGACGACCTC AGCGAAACCC TCAGCGAGGA GCCGCGTTTC
ATGAAGCTCA ACGGCACCTC GGGTCCCGGG GCAGCACCGG CATCCTTCGA CGTGGACAGA
GACTGA
 
Protein sequence
MTDDTSTDTE LESAIEDGEL EEVTESELDS ALEDGELDSA LEALLLVVDT PVTVDALAAA 
TDQPPARVAE RLHLLAAGLA ARDSGIDLRE AAGGWRMYTR SKYAPFVEKL LLDGARSKLT
RAALETLAVI AYRQPVTRAR VSAVRGVNVD AVIRTLLARG LITEAGTDSD SGAVTFSTTE
LFLERLGLTS LTDLPDIAPL LPNVDVIDDL SETLSEEPRF MKLNGTSGPG AAPASFDVDR
D