Gene Mvan_3220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3220 
Symbol 
ID4647620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3430199 
End bp3430627 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content68% 
IMG OID639806696 
Productprotein tyrosine phosphatase 
Protein accessionYP_954027 
Protein GI120404198 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.68434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCACGGA CCGCTCCGAG GGTGCTGTTC GTCTGTGTGA GCAACGCAGG CAAATCGGTG 
ATGGCGCAAG GCCTGATGCG TCATCTCGCG CCGACTCAGA TCACCGCACT GTCCGCCGGG
ACGAACGCCA AGGGGGCCGT CAACGACGTC TCTGCGCAAG CACTGGCCGA GCTGGGCATC
GACGTCAGTG CCCACCGGCC CACCCAGCTC ACCGACGAGA TGATCGATGA CGCCGACCTC
GTCGTGGTGG TGGGCACCCA GGCGCACGTG GACCCGGTGG GTGACACACC CGTCGAGGTG
TGGGACACCG ACGAGCCGTC CCTGCGGGGC ATCGACGGCA TGGAGCGCAT GCGGCTGATC
CGCGACGACA TCGCCGGACG GGTCGCCGCC CTGGCCGACC GTCTCACCCG TCAGCATCCA
CCGGTCTGA
 
Protein sequence
MSRTAPRVLF VCVSNAGKSV MAQGLMRHLA PTQITALSAG TNAKGAVNDV SAQALAELGI 
DVSAHRPTQL TDEMIDDADL VVVVGTQAHV DPVGDTPVEV WDTDEPSLRG IDGMERMRLI
RDDIAGRVAA LADRLTRQHP PV