Gene Mvan_3009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3009 
Symbol 
ID4648537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3177227 
End bp3177826 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content70% 
IMG OID639806489 
ProductTetR family transcriptional regulator 
Protein accessionYP_953820 
Protein GI120403991 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.101347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.721246 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAAGTC CTCGTGAGCG GATGGTCATC TCCGCGGCCC TGCTGATCCG GGAGCGCGGC 
GCCCACCCGA CGGCCATCGC CGACGTGCTC GCACACAGCG GCGCCCCACG CGGGTCCGCC
TACCACTACT TCCCTGGCGG CCGAACGCAG TTGCTCTGCG AAGCGGTCGA TTATGCCGGT
GAGTTCATCG CCGATCGGCT GGCGCAGGCG TCCACCACCG TCGAGGCGCT GGACGGTCTG
TTCGACGGAT ACCGCAAGCA ACTGCGCGAC AGCGATTTTC GCGCCGGCTG CCCGGTGGTG
GCGGTGACCG TGGAGGCGGG CGATCCGGAC AAGCCCGAGC AGTCGGCTGC CGTCATCGAG
CGCGCCGCCG CCGCCTTCGC CCGCTGGCAC GACCTGCTCG CGCAGCGGCT GATCGCCGAC
GGGCTCGCCC AGCCGGCCGC CACGGCTTTG GCCATGCTGG TGTTGACGTC GTTCGAGGGC
GCGATCGTCG TCGCCCGGGC ATCCCGGGAC CTCGCGGCGC TGGACCTCGT CCAGGAACAG
CTTCGTGAAC TGATCCGCAG TCACACCTCC CCCGCCGCGA GAAAGCGAGC CCCCCGATGA
 
Protein sequence
MTSPRERMVI SAALLIRERG AHPTAIADVL AHSGAPRGSA YHYFPGGRTQ LLCEAVDYAG 
EFIADRLAQA STTVEALDGL FDGYRKQLRD SDFRAGCPVV AVTVEAGDPD KPEQSAAVIE
RAAAAFARWH DLLAQRLIAD GLAQPAATAL AMLVLTSFEG AIVVARASRD LAALDLVQEQ
LRELIRSHTS PAARKRAPR