| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_2435 |
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| Symbol | dapF |
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| ID | 4647679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 2587903 |
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| End bp | 2588772 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639805918 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_953254 |
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| Protein GI | 120403425 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.1295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTTCG CCAAAGGTCA CGGTACGCAG AACGACTTCG TGCTGCTGCC CGACCTGACC
GCCGATCTGG CGCTGACACC GGCAGCCGTC GCCGCGCTGT GTGACCGCAG GCAGGGGCTG
GGTGCCGACG GGGTGCTGCG GGTGACGACC GCCGGGGCCG CCCGGGCCGC CGGGGTGTTC
GACCGACTGC CCGAGGGCGT CGTCGAGGGT GACTGGTACA TGGACTACCG CAACGCCGAC
GGATCCATCG CGCAGATGTG CGGCAACGGC GTGCGCGTGT TCGCGCACTA TCTGCGGGCC
AGCGGGCTCG AATCGCGCGA CGAATTCGTC GTCGGCTCGT TGGCCGGGCC CAGGCCCGTG
GTCCTCAACG CGCTCGCCGG GGTGGGCGCC GATGTCACCG TCGAGATGGG CAAGGCCAAT
CAGCTGGGTG TCGGGGCCGC CACGGTCGGC GGGCGACAGT TCAACGGTCT GGCCGTGGAC
GTCGGTAACC CGCATCTGGC CTGCGTCGAT GCGGCGATGA GCAGCCGGGA ACTGGCTGCG
CTCGACGTCG CGGCGCCGGT GGTGTTCGAT GCCGCGCAAT TCCCGGACGG CGTCAACGTG
GAGGTGCTCA CCGCACCGGA GGACGGCGCG GTGTCGATGC GGGTCCATGA ACGGGGCGTG
GGGGAGACCC GGTCCTGCGG CACCGGCACC GTCGCGGCGG CGGTCGCGGC GCTGGCCCAC
CAGGGCTCGC AGACCGGGTC GCTGACGGTG CGGATCCCCG GCGGTGAGGT CGTCGTCACG
ATCACCGACG CCAACAGCTA CCTGCGGGGC CCGTCGGTGC TGGTCGCACA CGGCGACCTC
GCCGACGAAT GGTGGGCGGC TCAGGGGTGA
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| Protein sequence | MKFAKGHGTQ NDFVLLPDLT ADLALTPAAV AALCDRRQGL GADGVLRVTT AGAARAAGVF
DRLPEGVVEG DWYMDYRNAD GSIAQMCGNG VRVFAHYLRA SGLESRDEFV VGSLAGPRPV
VLNALAGVGA DVTVEMGKAN QLGVGAATVG GRQFNGLAVD VGNPHLACVD AAMSSRELAA
LDVAAPVVFD AAQFPDGVNV EVLTAPEDGA VSMRVHERGV GETRSCGTGT VAAAVAALAH
QGSQTGSLTV RIPGGEVVVT ITDANSYLRG PSVLVAHGDL ADEWWAAQG
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