| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_2337 |
|---|
| Symbol | |
|---|
| ID | 4646114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 2496191 |
|---|
| End bp | 2496835 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639805821 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_953157 |
|---|
| Protein GI | 120403328 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0181151 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAACGG GAGTCGAACG CGCGGCGACG AGGCGGCGCA CCCAGGCCGA ACGTACTGCA
GCCATGCGCA CCCGACTGCT GGATGCCACG GTGGAGTGCC TGGTCACCTA CGGGTACGCG
GGCACCACGA CCCCGCGGAT CGTCGAGATC GCCGGGGTGA CGCGCGGCGC TCAGGTCCAT
CACTTCCGAT CCAAGGAGGA CCTGGTGGTC GCTGCCATCG AGCACCTCGC CGAGCAGCGC
ATCCAGGCGG CGATCCGGCA GAACGGGCGA CTGCTTTCGA GTCCCGACCC GGTGCCCAGG
GTGTTGGACT TTCTCTGGGA GTCGCACCAG GGCGACATGT TCGTGGCCAC GATCGAACTG
TGGGTCGCCG CGCGCACCGA TGATGTCCTC GCCCGCGAGG TGGCCCGTGT CGAGCCGATG
GTGAACAGCA CCCTGGTCGC TGCGATTGAT CAACTTCTCC CGAATACCTT CTCTCACAAG
AGGATTCGTA ACGCCATCTT CACCGCGATG GATGCGCTTC GTGGCATCCT GGTGGTCAGC
TTCGTCGATC GTGATCTCGA TCTCGCTCGT CGGCGCTGGG ACCGTGCGTG TGTCGACCTC
GGTTCGGCAC TCGCCGACGC GCTGAAAGCC GCACCGTCCG AGTAA
|
|---|
| Protein sequence | MRTGVERAAT RRRTQAERTA AMRTRLLDAT VECLVTYGYA GTTTPRIVEI AGVTRGAQVH
HFRSKEDLVV AAIEHLAEQR IQAAIRQNGR LLSSPDPVPR VLDFLWESHQ GDMFVATIEL
WVAARTDDVL AREVARVEPM VNSTLVAAID QLLPNTFSHK RIRNAIFTAM DALRGILVVS
FVDRDLDLAR RRWDRACVDL GSALADALKA APSE
|
|---|
| |