| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_2308 |
|---|
| Symbol | |
|---|
| ID | 4644343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 2465638 |
|---|
| End bp | 2467395 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639805792 |
|---|
| Product | prolyl-tRNA synthetase |
|---|
| Protein accession | YP_953128 |
|---|
| Protein GI | 120403299 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0442] Prolyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0228399 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.099086 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCACCC GCATGTCCGA GCTGTTCCTG CGCACCCTGC GCGACGATCC GGCCGACGCC
GAAGTGCCGA GCCACAAGCT GCTCATCCGG GCCGGCTACG TCCGGCCCGT CGGCCCCGGT
CTGTACAGCT GGCTGCCGCT GGGGCTGAAG GTGCTGCGCA AGATCGAGAA CATCGTCCGC
AATGAGATGA ATGCCATTGG CGGACAAGAG ATCCTGTTCC CCGCGCTGCT GCCACGCGCC
CCGTACGAGA CCACCAACCG GTGGACCGAG TACGGCGACA CCCTGTTCCG GCTGCAGGAC
CGCCGCAACA ACGACTACCT GCTGGGCCCC ACCCACGAGG AGATGTTCAC CCTCACCGTT
AAGGGCGAGT ACTCGTCGTA CAAGGACTTC CCGCTGCGGC TCTACCAGAT CCAGAACAAG
TACCGCGACG AGGCCCGACC CCGCGCGGGC ATCCTGCGTG GCCGCGAGTT CCTGATGAAG
GACTCCTACT CGTTCGACAT CGACGACGAC GGCCTCAAGA ACGCCTACAT CGCGCACCGC
GAGGCCTACC AGCGGATCTT CGACCTGCTC AAGGTCCGGT ACGTCATCGT CTCGGCCGTG
TCCGGGGCGA TGGGCGGCAG CGCCTCCGAG GAGTTCCTGG CCGAGAGCGA CGTCGGTGAG
GACACCTACG TGCGTTGCCT GCAGTCCGGC TATGCCGCGA ACGTCGAGGC CGTCGTCACC
ATGGTGCCGG AACCGATCTC CTCGGAGCAG ATTGCGGGGC TGGCGAGCGC AACCGTGCAC
CACACCGGCG ACACCCCGAC CATCGCCACG CTGGTGGACT GGGCCAACGG GGCGGATCTG
GGCCGGACCG TCACCGCCGC GGACACGCTG AAGAACGTGA TGCTCAAGGT GCGCGAGCCC
GGCGGCGAGT GGGAGCTGCT CGGCGTCGGC GTGCCCGGCG ACCGCGAGGT CGACGACAAG
CGCCTCGGGG CGGCGCTGGA ACCGGCCGAG TACGCAATGC TCGACGACGC CGACTTCGCC
AGATACCCGT TCCTGGTGAA GGGTTACATC GGTCCGAAAG CCTTGCTGGC CAACGGCGTC
CGCTACCTCG TCGACCCCAG AGTGGTGGAC GGCACAGCGT GGATCACCGG CGCCGACGAG
TTGGGTAAGC ACGTCGTCGA CCTGGTCGCC GGGCGCGATT TCACCCCGGA CGGCACGATC
GAGGCGGCCG AGGTCCGTGA GGGTGACCCC TCGCCGGACG GTGCCGGACC GCTGGTCGCC
GCGCGCGGCA TCGAGATCGG CCACGTCTTC CAGCTGGGCC GCAAGTACGC CGACGCGTTC
GGCGCCGACG TGCTCGGCGA GAACGGCAAA CCGGTGCGGC TGACCATGGG CTCCTACGGG
ATCGGGGTGT CGCGGTTGGT GGCGGTCATC GCCGAGCAGC ATCACGACGA ACTCGGGCTG
CGCTGGCCGT CGACCGTGTC ACCGTTCGAT GTGCACGTGG TGATCGCCAA CAAGGACGCC
GACGCGCGCA CGGGCGCCAC CGAACTGGCC GCCGAACTCG ACCGGCTCGG CGTCGACGTG
CTCCTCGACG ACCGGACGGC CTCGCCCGGC GTGAAGTTCA AGGACGCCGA ACTGCTCGGG
GTGCCGTGGA TCGTGGTGGT GGGGCGCGGC TGGGCCGACG GCATCGTCGA GTTGCGCGAC
CGGTTCGGCG GCGACAAGCA CGAGATCCCG GTCGACGGCG CGGCCGAGCG GATCAGCGCC
GCGCTGGCCG GGGCATAG
|
|---|
| Protein sequence | MITRMSELFL RTLRDDPADA EVPSHKLLIR AGYVRPVGPG LYSWLPLGLK VLRKIENIVR
NEMNAIGGQE ILFPALLPRA PYETTNRWTE YGDTLFRLQD RRNNDYLLGP THEEMFTLTV
KGEYSSYKDF PLRLYQIQNK YRDEARPRAG ILRGREFLMK DSYSFDIDDD GLKNAYIAHR
EAYQRIFDLL KVRYVIVSAV SGAMGGSASE EFLAESDVGE DTYVRCLQSG YAANVEAVVT
MVPEPISSEQ IAGLASATVH HTGDTPTIAT LVDWANGADL GRTVTAADTL KNVMLKVREP
GGEWELLGVG VPGDREVDDK RLGAALEPAE YAMLDDADFA RYPFLVKGYI GPKALLANGV
RYLVDPRVVD GTAWITGADE LGKHVVDLVA GRDFTPDGTI EAAEVREGDP SPDGAGPLVA
ARGIEIGHVF QLGRKYADAF GADVLGENGK PVRLTMGSYG IGVSRLVAVI AEQHHDELGL
RWPSTVSPFD VHVVIANKDA DARTGATELA AELDRLGVDV LLDDRTASPG VKFKDAELLG
VPWIVVVGRG WADGIVELRD RFGGDKHEIP VDGAAERISA ALAGA
|
|---|
| |