| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_2112 |
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| Symbol | ligA |
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| ID | 4647288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 2252981 |
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| End bp | 2255104 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639805595 |
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| Product | NAD-dependent DNA ligase LigA |
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| Protein accession | YP_952933 |
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| Protein GI | 120403104 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTTCCA AGGCGACCCA GGATCCCGAG GCGGTGCTGG CCGAGCAGTC CGACGACGCC
ACTGAAGCCG GCCTGCGCCG GCAATGGCAG GAGCTCGCCG ACGAGGTGCG CGACCACCAG
TTCCGCTACT ACGTGCGTGA CGCGCCGATC ATCACCGACG CCGAGTTCGA CGCGATGCTG
CGCAGGTTGG AGGCCCTCGA GGAGGCCCAC CCCGAGCTGC GCACCCCGGA TTCACCGACC
CAGCTGGTGG GTGGGGCCGG GTTCGCCACC GATTTCACCG CCGCCGAGCA CCTCGAGCGG
ATGCTCAGCC TGGACAACGT GTTCACCCCC GACGAGCTCG CCGCCTGGGC CGCCCGGATC
CGCACCGAGA TCGGTGCGGA CGCCCAATAC CTGTGCGAGC TGAAGATCGA CGGGGTGGCG
CTGTCGCTGG TCTACCGCGA CGGCCGGCTG GAGCGTGGGG CCACCCGCGG TGACGGCCGC
ACCGGTGAGG ACGTCACACT CAATGCCCGC ACCATCGAGG ACGTTCCCGA AAAGCTCACC
GGCACTGAGG AATTCCCGCT TCCCAGCGTT CTCGAGGTGC GCGGTGAGGT GTTCTTCCGG
ATCGCCGACT TCGAGGACCT CAACGCCGGG CTGGTCGCCG AGGGCAAACC GCCGTTCGCC
AACCCCCGTA ACAGCGCGGC CGGCTCGCTG CGCCAGAAGA ACCCGGCCGT CACCGCCAGG
CGCAGGCTGC GGATGATCTG CCACGGCCTC GGCCACATCG AAGACGCTGC GGGCTTCCCC
TTCAGGACGT TGCACGACGC GTACCGCGCG CTGCAGGCCT GGGGGTTGCC GGTCTCACCA
CACACCGCCC AGGTCACCGG CCTGGACGCG GTCACCGAAC GCATCGCCTA CTGGGGCGAG
CACCGGCACG ACGTCGAGCA CGAGATCGAC GGCGTGGTGG TCAAAGTGGA CGAGGTGGCG
CTGCAACGGC GCCTCGGGGC CACGTCGCGC GCCCCGCGCT GGGCGGTCGC CTACAAGTAT
CCGCCCGAGG AGGCTCAGAC CAAGCTGCTC GACATCCGGG TCAATGTCGG ACGCACCGGC
CGGGTGACCC CGTTCGCCTA CATGGAGCCG GTCAAGATCG CGGGCTCCAC GGTCGGGCTG
GCCACGCTGC ACAACGGCTC CGAGGTCAAA CGCAAGGGCG TGCTGATCGG CGACACCGTG
GTGATCCGCA AGGCCGGCGA CGTGATTCCC GAGGTGCTCG GACCGGTCGT CGATCTGCGC
GACGGCAGCG AGCGCGAATT CGTGATGCCG ACGCACTGCC CGGAGTGCGG CACCGAACTG
GCCCCCGCCA AGGAGGGCGA CGCCGACATC CGCTGCCCCA ACTCCCGCAC CTGCCCGGCG
CAGTTGCGGG AGCGGGTCTT TCACGTCGCG GGCCGGGGCG CCTTCGACAT CGAGGGCCTG
GGCTACGAAG CCGCGATCGC GCTACTGCAG GCCCGCGTCA TCACCGACGA AGGCGACCTG
TTCACACTTA CCGCAGACGA CCTGCTGCGC ACCGACCTGT TCACCACCAA GGCCGGCGAG
CTGTCCGCCA ACGGCAAGCG GCTGCTCACC AACCTGGGCA AGGCCAAGGC CCAACCGTTG
TGGCGGGTGC TGGTGGCGCT GTCGATCCGG CACGTCGGAC CGACGGCGGC GCGTGCGCTG
GCCACCGAGT TCGGCAGCCT CGACGCGATC GTCGCGGCCT CGGAGGAGGA ACTGGCCGCC
GTCGAGGGCG TCGGCCCCAC GATCGCGGCT GCGGTCACCG ACTGGTTCAC CGTCGACTGG
CACCGCACGA TCGTCGACAA GTGGCGCGCT GCCGGGGTGC GGATGGCCGA CGAGCGCGAC
GCCAGCATCG AACGCACTCT GGATGGGCTG TCGATCGTCG TCACCGGATC GCTGACCGGC
TACAGCCGCG ACGAGGCGAA GGAGGCCATC ATCGCTCGCG GCGGCAAGGC GGCCGGTTCG
GTGTCGAAGA AGACCGCCTA TGTGGTGGCC GGCGACTCGC CCGGGTCCAA GTACGACAAG
GCCATCGAGC TGGGAGTGCC GGTGTTGGAC GAGGACGGGT TCCGCCGGCT GCTCGAAAAC
GGGCCCGACA CACCGGACTC CTAG
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| Protein sequence | MSSKATQDPE AVLAEQSDDA TEAGLRRQWQ ELADEVRDHQ FRYYVRDAPI ITDAEFDAML
RRLEALEEAH PELRTPDSPT QLVGGAGFAT DFTAAEHLER MLSLDNVFTP DELAAWAARI
RTEIGADAQY LCELKIDGVA LSLVYRDGRL ERGATRGDGR TGEDVTLNAR TIEDVPEKLT
GTEEFPLPSV LEVRGEVFFR IADFEDLNAG LVAEGKPPFA NPRNSAAGSL RQKNPAVTAR
RRLRMICHGL GHIEDAAGFP FRTLHDAYRA LQAWGLPVSP HTAQVTGLDA VTERIAYWGE
HRHDVEHEID GVVVKVDEVA LQRRLGATSR APRWAVAYKY PPEEAQTKLL DIRVNVGRTG
RVTPFAYMEP VKIAGSTVGL ATLHNGSEVK RKGVLIGDTV VIRKAGDVIP EVLGPVVDLR
DGSEREFVMP THCPECGTEL APAKEGDADI RCPNSRTCPA QLRERVFHVA GRGAFDIEGL
GYEAAIALLQ ARVITDEGDL FTLTADDLLR TDLFTTKAGE LSANGKRLLT NLGKAKAQPL
WRVLVALSIR HVGPTAARAL ATEFGSLDAI VAASEEELAA VEGVGPTIAA AVTDWFTVDW
HRTIVDKWRA AGVRMADERD ASIERTLDGL SIVVTGSLTG YSRDEAKEAI IARGGKAAGS
VSKKTAYVVA GDSPGSKYDK AIELGVPVLD EDGFRRLLEN GPDTPDS
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