Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_2050 |
Symbol | |
ID | 4646725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 2189383 |
End bp | 2190060 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639805535 |
Product | putative transcriptional regulator |
Protein accession | YP_952873 |
Protein GI | 120403044 |
COG category | [K] Transcription |
COG ID | [COG2345] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.483871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.488143 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTAC AAGGCCGCGA CACCGACAAG GCGTCGGACC GGGCCGCGGG CCGGCAGCGG CAGAAGGTGC TGGGGCTGCT GCGCGAGACG AAACGGCCTC TCGACGCCCA GGGCGTCGCC GACACGCTGC AGATCCATGT CACCACCGCA CGGTTTCACC TGTCGGCACT GGAGTCCCAG GGCTATGTGC GGCGGGGCCG CGGTCCCAAG GCGGCGGGGG CGGGGCGGCC CAAGCTGACC TACGAACTGG CCCCGCGGCT GGATTACGCC GACATCGTGT GCCTGTTCGC CACGCACCTG GGCGGCACGC CGCAGGAACG GGAATCGCGG GCGCGGCGTA TCGGTGCCGA CCTGGCTCAC CGGGTGCGCC TGGCCAGGCC GCGCGACGAG ACCTCGATCG CCGACCTGGT GGTTGCGACG TTGACGGAGT TGGGATTCCA AGTGCGCTCG TTGCTGTCGT CATTCGGCGA GGTGACCGTG CAGCTGTGCA CATGCCCGCT CGCCGAGGTC GCCAAGGCGG CACCCGAAGT GGTCCGCGGT ATCCAGCAGG GCATGATTCA AGAAGTGATC GACGTGAATG CCGCGTCGAT CGGCGGAAAC TACAGCGTCG CGGTGACCCC GGATCCGCAC GCGGGCTCGT GCGAGATCGG TTTGATTCTT CGCCCGGCCC GAGGCTGA
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Protein sequence | MAVQGRDTDK ASDRAAGRQR QKVLGLLRET KRPLDAQGVA DTLQIHVTTA RFHLSALESQ GYVRRGRGPK AAGAGRPKLT YELAPRLDYA DIVCLFATHL GGTPQERESR ARRIGADLAH RVRLARPRDE TSIADLVVAT LTELGFQVRS LLSSFGEVTV QLCTCPLAEV AKAAPEVVRG IQQGMIQEVI DVNAASIGGN YSVAVTPDPH AGSCEIGLIL RPARG
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