Gene Mvan_1828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1828 
Symbol 
ID4644208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1950073 
End bp1950948 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content69% 
IMG OID639805317 
Producthypothetical protein 
Protein accessionYP_952656 
Protein GI120402827 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.607728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.571531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCGC TCACCATCGG CCTGGCCGTC TTCGTCGGCA TCGCCCTGGG ACTGCTCGGC 
GGCGGCGGAT CCATCCTCAC CGTCCCCCTG CTGGCCTACG TCGCCGGCAT GGACGCCAAA
GCCGCGATCG CCACCTCACT GCTCGTGGTC GGGGTCACCA GCGCCATCGG CGCCATCTCC
CACGCCCGCG CCGGCCGAGT GCAATGGCGC ACCGGCCTGA TCTTCGGCGC CGCCGGCATG
GCCGGCGCCT ACGCCGGCGG CCTGCTGGCC CGCTACATCC CCGGCACCAT CCTGCTCATC
GGGTTCGCCG TCATGATGAT CGCCACCGCC ATCGCCATGC TGCGCGGACG CAAAACCATC
GAAACCGGCG AAACCGGCCA CCGCCTACCC GTGCCCAAAA TCGTCGCCGA AGGACTCATC
GTCGGCCTGG TCACCGGCCT CGTCGGCGCC GGCGGCGGCT TCCTCGTCGT CCCCGCCCTC
GCCCTGCTCG GCGGACTCCC CATGCCCATC GCCGTGGGCA CCTCACTGAT CGTCATCGCC
ATGAAATCCT TCGCCGGCCT GGCCGGCTAC CTGACCAGCG TCCACATCAA CTGGACCCTC
GCCCTGGCCG TCACCGCCGC CGCCGTCATC GGCGCCCTCA TCGGCGCCCG ACTCACCGCC
ATGATCAACC CCGACTCACT ACGCAAAACC TTCGGCTGGT TCGTCCTGGT CATGTCCTCA
GTCATCCTCG CCCAAGAAAT CCACCCCGCC GTCGGCATCA CCGCCGCCGC ACTCACCCTG
ATCGCCGCAG CCACAACACT CGCCTGCCAG CGCTACGCCC ACTGCCCACT GAGCCGACTC
ACCACACGAC TCACCACACC CAAAGCAGCC GCATGA
 
Protein sequence
MIALTIGLAV FVGIALGLLG GGGSILTVPL LAYVAGMDAK AAIATSLLVV GVTSAIGAIS 
HARAGRVQWR TGLIFGAAGM AGAYAGGLLA RYIPGTILLI GFAVMMIATA IAMLRGRKTI
ETGETGHRLP VPKIVAEGLI VGLVTGLVGA GGGFLVVPAL ALLGGLPMPI AVGTSLIVIA
MKSFAGLAGY LTSVHINWTL ALAVTAAAVI GALIGARLTA MINPDSLRKT FGWFVLVMSS
VILAQEIHPA VGITAAALTL IAAATTLACQ RYAHCPLSRL TTRLTTPKAA A