Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_1807 |
Symbol | |
ID | 4644063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 1918569 |
End bp | 1920701 |
Gene Length | 2133 bp |
Protein Length | 710 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639805295 |
Product | UvrD/REP helicase |
Protein accession | YP_952635 |
Protein GI | 120402806 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.388525 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.14229 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGAGG CCATGTCCCC GACGGCCTCC CGCGACCGGC TGCTCGGTGA CCTCGACGAC GAACAGCGTG AGGCTGTGCT CGCACCCCGC GGCCCGGTCT GCGTGCTCGC CGGCGCCGGT ACCGGCAAGA CGCGCACAAT CACCCGCCGC ATCGCCCATC TGGTGACGGC CGGGCACGTC GCCCCAGGAC AGGTGCTGGC GGTCACCTTC ACCCAGCGCG CGGCGGGTGA GATGCGGGGC CGGTTGCGCG CACTCGGCGG CGACGAGGCA GGGGCGTCCA CTGCGGCGGT GCAGGCGCAG ACGTTCCACG CCGCCGCGCG GCGCCAGCTG TCGTACTTCT GGCCGAGGGT CGTCGGCACC ACCGACTGGC AGCTGATGGA CAGCAAGTTC GCCGTCGTCG CGCAGGCCGC CAACCGGGCC GGGCTGCCCA CCGGCACCGA CAACGTCCGC GACCTCGCCG GTGAAATCGA ATGGGCCAAG GCGTCTTTGA TCACGCCTGA GGGCTATCCG CAGGCCGTCG CCGACGTCGG CCGCGACATC CCGTTCGACG CCGCCAAGGT CGCCGCCGTC TACGGCAACT ACGAGTCGCT CAAGTCCCGC CGTAACGATG TCATGCTTCT AGACTTTGAC GACCTGCTGC TGCACACCGC CGCCGCGATC GAGAACGACC CCGCGGTGGC CCAGGAGTTC CGGGACCGGT ACCGCTGCTT CGTGGTCGAC GAGTACCAGG ACGTCACCCC GCTGCAGCAG CGGGTGCTCG ACGCCTGGCT CGGCGGCCGC GACGACCTGA CCGTCGTCGG CGACGCGAAC CAGACCATCT ACTCGTTCAC CGGCGCCTCG CCGCGCTACC TGCTCGACTT CTCGCGTCGC TTCCCCGACG CCGCGGTGGT CCGGCTGGAA CGCGACTACC GCTCCACCCC GCAGGTGGTG TCGCTGGCCA ACCGCGTCAT CGCCGCCGCG CGCGGCCGCA TGGCGGGCAG CAGGCTGCAC CTGGTCGGTC AACGCCCGCC GGGACCCGAC CCGGTGTTCA AGGAGTACCC CGACGAGGTC GCCGAGGCCA CGGCCGTCGC CCGCAGCATC GCCAAGCTCG TCGAATCCGG AACCGCCGCT TCGGAAATCG CGGTGCTCTA CCGCATCAAC GCCCAATCGG AGGTCTACGA GGAGGCGCTC ACCGAGGCCG GCATCGCCTT CCAGGTCCGC GGCGGTGAAG GGTTCTTCAG CCGTCAGGAG ATCCGGCAGG CGCTGCTGGC GTTGCAGCGG CTCGCCGAGC GCGGCCTGCA GGACACGGCA GATTCGCTGC CGGAGTTCGT GCGCGCGGCG CTCGAACCCC TCGGCCTGAC CGCCGAGCCG CCGCCGGGCG CGCAGGCCAG GGATCGCTGG GAGGCGCTGG TCGCGCTCGC CGAGCTGGTC GACGACGAGG TGGCGCAGCG CCCGCAGCTG GACCTGCACG GCCTGCTCGC CGAGTTGCGG CAGCGCGCCG ATTCCCGGCA CCCACCCGTC GTGCAGGGCG TCACGCTGGC GTCGCTGCAC GCCGCGAAGG GCCTGGAGTG GGATGCGGTG TTCCTCGTCG GGCTCGCCGA CGGCACACTG CCGATCTCGC ATGCGCTTGC CCATGGCCCC GACAGTGAAC CGGTCGAGGA GGAACGTCGG CTGCTCTATG TCGGCGTCAC CAGGGCGCGC GTGCATTTGA CGTTGAGTTG GGCGCTGGCC CGCAAGCCGG GCGGCAGGCA GGGTCGCCGT CCGTCGCGGT TCCTCAACGG CATCGCGCCG CAGTCCCAGC GCGACGACGG CCCCAGCAAG CCCCGCAAGC CGCGCGGGCC GGCCCCGCGC TGCCGGGTGT GCAACGCGGC GCTCACCTCG CCGCCGGCCA TCATGTTGCG CCGCTGCGAA ACCTGCCCGT CCGACATCGA CGAGCAACTT CTCGCCGACC TCAAGGACTG GCGGCTGCGG ATCGCCAAAG AGATGAACGT GCCGGCCTAT GTGGTGTTCA CCGACAACAC GCTGATCGCG ATCGCCGAAT CGCTGCCGTC CGACGACGCG GCGCTCGTGG CGATCCCCGG AATCGGCGCC CGCAAGCTCG AACAGTTCGG CCCCGACGTG CTCGCACTGG TCAAAGGCCG CCAAAAATCG TAA
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Protein sequence | MMEAMSPTAS RDRLLGDLDD EQREAVLAPR GPVCVLAGAG TGKTRTITRR IAHLVTAGHV APGQVLAVTF TQRAAGEMRG RLRALGGDEA GASTAAVQAQ TFHAAARRQL SYFWPRVVGT TDWQLMDSKF AVVAQAANRA GLPTGTDNVR DLAGEIEWAK ASLITPEGYP QAVADVGRDI PFDAAKVAAV YGNYESLKSR RNDVMLLDFD DLLLHTAAAI ENDPAVAQEF RDRYRCFVVD EYQDVTPLQQ RVLDAWLGGR DDLTVVGDAN QTIYSFTGAS PRYLLDFSRR FPDAAVVRLE RDYRSTPQVV SLANRVIAAA RGRMAGSRLH LVGQRPPGPD PVFKEYPDEV AEATAVARSI AKLVESGTAA SEIAVLYRIN AQSEVYEEAL TEAGIAFQVR GGEGFFSRQE IRQALLALQR LAERGLQDTA DSLPEFVRAA LEPLGLTAEP PPGAQARDRW EALVALAELV DDEVAQRPQL DLHGLLAELR QRADSRHPPV VQGVTLASLH AAKGLEWDAV FLVGLADGTL PISHALAHGP DSEPVEEERR LLYVGVTRAR VHLTLSWALA RKPGGRQGRR PSRFLNGIAP QSQRDDGPSK PRKPRGPAPR CRVCNAALTS PPAIMLRRCE TCPSDIDEQL LADLKDWRLR IAKEMNVPAY VVFTDNTLIA IAESLPSDDA ALVAIPGIGA RKLEQFGPDV LALVKGRQKS
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