| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1579 |
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| Symbol | |
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| ID | 4648620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 1672600 |
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| End bp | 1673547 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639805075 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_952415 |
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| Protein GI | 120402586 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.212502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0425272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGA TCGAGCTCGA CGCGGCAGGG GTGCGGGATC CGGAGCTGCG TGACGCCTAC
CGGCAGTGCC GGACCATCAA CGCCCAACAC GGCAAGACCT TCTACCTGGC CACCCGGCTG
CTTGCGCCCA GGCAACGGCC CGCGGTGCAC GCGCTGTACG GTTTCGCCCG CTTCGCCGAC
GACATCCTCG ACGACCTCGC CGACACGGCG ACCGTCGAGC AGCGGGCCGA GAGGCTCCAG
CAGCTGTCCA CCCGGCTTTT CCACTGCCTG GTGGACAAGG AGTCCTGTGA GGGCGATCCG
ATCCTGACCG CGGTGGTGCA CACCGCGCGC ACCTACGACA TCGGCTGGGA TCTGTTCGAC
GACTTCCTGG CGTCGATGCG GATGGATCTG ACCGTGACGG ACTATCCGGA CCGGCAGGCG
CTGGAGCGCT ACATGTACGG CTCGGCCGAG GTGATCGGGC TGCAGATGCT GCCGGTGCTC
GGCACCGTCG GCCCGCGCGA GGAGGCCGCG CCCTATGCGG CGGCGCTGGG CAAGGCGTTC
CAGCTGACCA ACTTCCTGCG AGACGTGGAC GAGGATCTGA CCCGCGGGCG CGTCTACCTG
CCGGCCGACG AACTGGCCGC CCACGGTGTC GACCGCGAAC TGCTGACCTG GTGCCAGGCC
AACGGCCGCA TCGAGCCCCG GGTGCGTGCC GCGCTGGCCG AACAGCACGC GATCACCCGC
CAGGTGTATC AGCAGGCCCG ACCCGGAATC GCCGCGCTGG CGCCGCCGTC GCGGCCCTGC
GTGGCGGCGG CGCTGACGCT GTACTCCGAC ATCCTTTCGC GAATCGAGGC GATCGACTTC
GAGATCTTCG GCCGGCGTGC GACGGTGGGT AAACCGCGAC GATTGGTCGT CGCCGCAGCG
GGCATAGGTA AGGCGTGGGG ACAGCGGATG CGATCCAGGG GAGCGTAA
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| Protein sequence | MIKIELDAAG VRDPELRDAY RQCRTINAQH GKTFYLATRL LAPRQRPAVH ALYGFARFAD
DILDDLADTA TVEQRAERLQ QLSTRLFHCL VDKESCEGDP ILTAVVHTAR TYDIGWDLFD
DFLASMRMDL TVTDYPDRQA LERYMYGSAE VIGLQMLPVL GTVGPREEAA PYAAALGKAF
QLTNFLRDVD EDLTRGRVYL PADELAAHGV DRELLTWCQA NGRIEPRVRA ALAEQHAITR
QVYQQARPGI AALAPPSRPC VAAALTLYSD ILSRIEAIDF EIFGRRATVG KPRRLVVAAA
GIGKAWGQRM RSRGA
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