| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1548 |
|---|
| Symbol | |
|---|
| ID | 4648281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 1637358 |
|---|
| End bp | 1637921 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639805044 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_952384 |
|---|
| Protein GI | 120402555 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.664164 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.297776 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGGC CCGCTCGATA CACCACCGAT GTTCTGCTCG ACGCCGCTGC GGAGCTGCTC
GCCGCGGAGG GCCCGGCCGC GGTGACGATG TCGGCGGTCG CGCGCAGCAC CGGCGCGCCG
AGTGGCTCGG TGTACCACCG CTTCCCGACG CGCGCGGCAC TGTGCGGCGA GCTGTGGGTG
CGCACCGAGG AGCGCTTCCA GGGGGAGCTG ATCGAGGCGT TGTCAGTCGA CGGCGACGCC
CAGCAGCGCT GCGTGTCCGG CGCGCTTCGG ATCGTGCAGT GGTGTCGCGA CAACCCCGTC
GAGGCGCAGG TCATGCTCGC CGGCCCCACC GAACTCGGAA TGGGCGACTG GCCAGAGCCG
GTGACGAGTC GACGGAAACG CTTGCAGCGC AAACTGCGTA AGGCGCTCTC CGACCTGTCC
GACGACACCG CGCGGGTCAA CGCCGCGATC GTCGACGTGC CCGCCGCGAT CGTGCGGCGT
CACCTGCGGG CGGGTCAGAC CATTCCGGCG GTCGCCGACG CGATCGTGGA GGAGTGCGCC
CGCGCGCTCA TCGCCCCGAG CTGA
|
|---|
| Protein sequence | MPRPARYTTD VLLDAAAELL AAEGPAAVTM SAVARSTGAP SGSVYHRFPT RAALCGELWV
RTEERFQGEL IEALSVDGDA QQRCVSGALR IVQWCRDNPV EAQVMLAGPT ELGMGDWPEP
VTSRRKRLQR KLRKALSDLS DDTARVNAAI VDVPAAIVRR HLRAGQTIPA VADAIVEECA
RALIAPS
|
|---|
| |