Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_1232 |
Symbol | |
ID | 4646875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 1317808 |
End bp | 1318341 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639804732 |
Product | (3R)-hydroxyacyl-ACP dehydratase subunit HadC |
Protein accession | YP_952073 |
Protein GI | 120402244 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.581522 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTCA AAACCGACAT CCGCGGGATG GTCTGGGAAT ACCCTGACGT CTTCGTCGTT GCGCGCGAAC AGATCCGCCA ATACGCGAAC TCGGTCAAGG CGAAGGATCC GGCCACCCAC GACGAGGCCG CGGCGGCCGA GCTCGGGCAC AGCGGGATCA TCGCACCGCC GACTTTCATG TCGATCTTCG CGGTGATGAT CCAGAACCAT TTCTTCCAGC ACGTCGACGT GGGTCTGGAA ACGTTGCAGA TCGTGCAGGT CGACCAGCGG TTCCTGTTCC ACCGTCCGAT CAAGGACGGC GACCGACTCC GGGGCGCGCT GACCATCCTG ACCGTGGACG AGCGGTTCGG TGCCGACATC GTGACGACAC GTAACGTCCT GACCGATGAC GCGGGCGAAA TCGTGATGGA GTCGTTCACC ACGCTGATGG GCCATGAAGG GGACAACTCG ATCTCGGCCG GATGGGACCC CGAAACCGGC CAGGTGCTCC GCAAGCCCGT CGCGCACGAC CCGGCCGACG ACGCGGGGCA GTAG
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Protein sequence | MALKTDIRGM VWEYPDVFVV AREQIRQYAN SVKAKDPATH DEAAAAELGH SGIIAPPTFM SIFAVMIQNH FFQHVDVGLE TLQIVQVDQR FLFHRPIKDG DRLRGALTIL TVDERFGADI VTTRNVLTDD AGEIVMESFT TLMGHEGDNS ISAGWDPETG QVLRKPVAHD PADDAGQ
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