Gene Mvan_1232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1232 
Symbol 
ID4646875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1317808 
End bp1318341 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content64% 
IMG OID639804732 
Product(3R)-hydroxyacyl-ACP dehydratase subunit HadC 
Protein accessionYP_952073 
Protein GI120402244 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.581522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTCA AAACCGACAT CCGCGGGATG GTCTGGGAAT ACCCTGACGT CTTCGTCGTT 
GCGCGCGAAC AGATCCGCCA ATACGCGAAC TCGGTCAAGG CGAAGGATCC GGCCACCCAC
GACGAGGCCG CGGCGGCCGA GCTCGGGCAC AGCGGGATCA TCGCACCGCC GACTTTCATG
TCGATCTTCG CGGTGATGAT CCAGAACCAT TTCTTCCAGC ACGTCGACGT GGGTCTGGAA
ACGTTGCAGA TCGTGCAGGT CGACCAGCGG TTCCTGTTCC ACCGTCCGAT CAAGGACGGC
GACCGACTCC GGGGCGCGCT GACCATCCTG ACCGTGGACG AGCGGTTCGG TGCCGACATC
GTGACGACAC GTAACGTCCT GACCGATGAC GCGGGCGAAA TCGTGATGGA GTCGTTCACC
ACGCTGATGG GCCATGAAGG GGACAACTCG ATCTCGGCCG GATGGGACCC CGAAACCGGC
CAGGTGCTCC GCAAGCCCGT CGCGCACGAC CCGGCCGACG ACGCGGGGCA GTAG
 
Protein sequence
MALKTDIRGM VWEYPDVFVV AREQIRQYAN SVKAKDPATH DEAAAAELGH SGIIAPPTFM 
SIFAVMIQNH FFQHVDVGLE TLQIVQVDQR FLFHRPIKDG DRLRGALTIL TVDERFGADI
VTTRNVLTDD AGEIVMESFT TLMGHEGDNS ISAGWDPETG QVLRKPVAHD PADDAGQ