Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_1143 |
Symbol | |
ID | 4646707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 1214954 |
End bp | 1217548 |
Gene Length | 2595 bp |
Protein Length | 864 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639804641 |
Product | SecC motif-containing protein |
Protein accession | YP_951984 |
Protein GI | 120402155 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCCGCT ACACGCGCAG TCTGAACGCG ATCGCATACC GTGGTGGCGT GGCAGCACAG CTCGACCCGA CCAAAGCCCT TGCGACGATT CTGATCGAGC ACGGCCCCCT CCCCAAGGAC GCTATCGCGC ACCGCCTTCG CGAGATGGGC GTCGCGGATC CCGAGGATCT CCTCCCCCGT CTGTTGAACG AGATCGACTG TCCCGCTGTG CCATTGGTCG ACGAGAGCTG GGTGTGGCTG CCCGCGTTGC TGGCCGGTCG GATATTCACG CACCGGGTCA CAGCCCAGGA GCTGGCCCAC GACGTCCTGC TCGTGACCCC GGACCTCGAC GCGATCACCC ACCTGTGCGA ATTCGAGCCG TACGCGCGTC TGGTCGACGG CTCGCCGGTC AGCGTCGCGT TGCCGGCCTT CGACGAGGAC GTGCTCGACG AGCGGGGCGT TCCGCCGGAG ATGGTCGACG ACGGCGGGGC GCTGGTCCTG CCGCCGGGCA CGCTGCGCGG CCTGGGAGTC GTCGACGGCG ATCTGGTCGG TCTGCGGTTG GCGCCCGAGG GACTCACCCT CGCCCAGGTC ACCGCGGACC CGTCGCCTGC GGTGGGCGCC GCGCTGGCGG CCACGCTGAA CCCTGACGAG CCGGTGTCCT TCGATTCAGC CGTGTGGACG GCGTGCGTGG CGCATTCGGC GCTGTTCACC GAGCCCACAC CGCCGCTGTC GGAGATCGCC GCCGACCACG GCCTGGAGGC CCGCGGGGAC CTGCTCGCAC CCGCGGGTTT CGACTTCGAC CGGTGGCGCT TCGAGCTGGA TTGTGAGGTC CTGAAGAGGC GGTACGACCT CGACGACGAT GATGCGCTCG CCGTGCGCGC GCTCAAGGCC ATCTATGAGC AGATGTCGCA GCTGATCACG ATGTTGCCCG CGGACGAGGA CTTCGCCGAC GACGCAGACG AGGACGCCGC AGCCGAGGAC GCGCCGGTGC CGCCCCTCGA CGGATACCAG GAGCTGGTCG CCGAAATGGG CGCCGAGCTT GCCGATCCGC GGCTGGCCGA GGTGCTGGTG GCCGAGACGC TGGGCCGCGA TCCCGATGGC GCCGCGGCGC TGGGGTTGTT CGCCGAGACG CTGGAGCCAC AGGTGCCGCG CCGCGCGCGG GTGGCGTTCC GCTGGCTACG AGCGGTGGCG CTGGAGCGCA TGGGCGACAT CGAGTCGGCC GAACGGGAGC TGCTGGCCGC CGAGTCGATG GACACCGACT GGCCCTTGCC GTTGTACGAC CTGGCCCGGA TCGCGTCCGA CCGCGGTGAC GTCGAGCGCG GGTTGGCGTT GCTTCGCCGC GCCGGAGCCG ATCCGGACGA TCCGTTGCTG GAGATGCTGA GCAGCTTTCG GGGCGAGGCC CGCCCCGACG TCGGCCGCAA CGAGCCGTGC TGGTGCGGGT CGGGCCGCAA GTACAAGAAG TGCCATCTCG GAAAGGAGCA GCCGGCGCTC CCCGAGCGCG TGGGTTGGCT GTACTCGAAG GCAGCGCAGC ACGCGCTGAT GAGTGGCTGG CGCGCACTGA TCGTCGAACT GGACTACGAG CGCAACCAGT TTCACGATGC GCCCGACGAG ACGGCGGACC CGTTGGTAGT CGATGCGGCG TTGTTCGAGG GCGGCGCGTT CGAGGACTTC CTGGCCGTCC GCGGACCGCT GCTGCCCGAA GACGAGCGGT CGCTGGCCGA GCAATGGCTG CTGGTGGACC GGTCGCTCTT CGAAGTCGGG CAGGTGCGCC CCGGCCACGG GGTGACCGTA CGCGACGTGC GCACCGGTGA CATCCACGAG GTGCAGGAGC GCACCGCCAG CCGTCACCTC AAGTCTGGAC AGCTGATCTG CACCCGGGTG CTGCCCGCCG GCGACGACAC CGCGCAGTTC TTCGGCGGGC TGGAACCCGT TGCGCTGCAT CAGCGTGACG CACTGATCGC GCTGCTCGAC GAGGGGCCTG ACCCGGTGGA CCTCGTCGCG TTTCTGAGCC TCCGGTTCGC CCCGCCGACG CTGACCAACA CTGAGGGTGA CCCGATGATC ATCTGTGAGG CCACCGTCCA CGTCGGCGAT GCGGCGTCAA TCCAGTCGGC GCTTGACGAC ACCTACGACC GGGTCGAGGA CGCTGAGCCG CCTAAGTGGT TCGAGCACGT CACCACGCAC GGCATGGAGC GCATCCGCGC GACGTTGGCG CTCGACGGGG AGACGCTGCG GGTGGAGACC AACAGCGAGG AACGGATGGA CCGGGTGCTG GCCACGGTGG CGCGGCTCGA CCCGGCGATG CAGGTTCTCG AGGACACCCG CGAGTACGTG GACGACCCGC GCGCGATGGC CGCGCGCATG CCGGAAACTG CCAAGGGGGC GATCGAGCCC GACGACCCCG AGATCGCCGC GCTGCTCGAC GCGATGATCC TGGACTACGA GGCCAAGTGG CTGGACGAAC CGATCCCGGC ACTCGACGGG CACACCCCAC GCCAGGCCGC CGATGACCCG ACCCGCCGGC CCGACCTGAT TCGACTGCTC GACTCCTTCC CTGCCGACGC GGGCCGCCAT GGGATGAGCG TGGACCGGCT CCGGGCGGCG TTGGGGTTGC CGTAG
|
Protein sequence | MGRYTRSLNA IAYRGGVAAQ LDPTKALATI LIEHGPLPKD AIAHRLREMG VADPEDLLPR LLNEIDCPAV PLVDESWVWL PALLAGRIFT HRVTAQELAH DVLLVTPDLD AITHLCEFEP YARLVDGSPV SVALPAFDED VLDERGVPPE MVDDGGALVL PPGTLRGLGV VDGDLVGLRL APEGLTLAQV TADPSPAVGA ALAATLNPDE PVSFDSAVWT ACVAHSALFT EPTPPLSEIA ADHGLEARGD LLAPAGFDFD RWRFELDCEV LKRRYDLDDD DALAVRALKA IYEQMSQLIT MLPADEDFAD DADEDAAAED APVPPLDGYQ ELVAEMGAEL ADPRLAEVLV AETLGRDPDG AAALGLFAET LEPQVPRRAR VAFRWLRAVA LERMGDIESA ERELLAAESM DTDWPLPLYD LARIASDRGD VERGLALLRR AGADPDDPLL EMLSSFRGEA RPDVGRNEPC WCGSGRKYKK CHLGKEQPAL PERVGWLYSK AAQHALMSGW RALIVELDYE RNQFHDAPDE TADPLVVDAA LFEGGAFEDF LAVRGPLLPE DERSLAEQWL LVDRSLFEVG QVRPGHGVTV RDVRTGDIHE VQERTASRHL KSGQLICTRV LPAGDDTAQF FGGLEPVALH QRDALIALLD EGPDPVDLVA FLSLRFAPPT LTNTEGDPMI ICEATVHVGD AASIQSALDD TYDRVEDAEP PKWFEHVTTH GMERIRATLA LDGETLRVET NSEERMDRVL ATVARLDPAM QVLEDTREYV DDPRAMAARM PETAKGAIEP DDPEIAALLD AMILDYEAKW LDEPIPALDG HTPRQAADDP TRRPDLIRLL DSFPADAGRH GMSVDRLRAA LGLP
|
| |