| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0945 |
|---|
| Symbol | |
|---|
| ID | 4645852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 975569 |
|---|
| End bp | 976555 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639804445 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_951789 |
|---|
| Protein GI | 120401960 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.165164 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACA AACAACAACC CCTCGGATCC GGCTTCACCG CCGCGTCCAC CGCCGCCGAC
GTTCTCGCCG GCATCGACCT GACGGGGCGC AACGCCATCG TCACCGCCGG CCACGTCGGC
CTCGGGCTCG AAACCACCCG CGCCCTTGCC GATGCCGGTG CCAACGTCGT AGTGGCCAGC
CGTAATCCCG AGACGGCCGC GGCGGCGCTC GTCGGTGTCG AGCGCGTGCG GGTCGAGCAG
TTGGACCTGA TGGACCCCGC ATCGATCGAA CGGTTCGTGG CCGGTTACGG CGAGGCCGCG
CTGCACATCC TGATCAACAA CGCCGGCATC ATGGGCGGCG ACCTCGTCCG CGACGCGCGC
GGTTACGAAG CCCAGTTCGC GACCAACCAC CTCGGCCATT TCCAGCTGAC CAACGGGTTG
CTGCCCGCCC TGCGCGCGGC CGACGGCGCC CGCGTCGTCG AGGTGTCGTC GTGGGGCCAC
CACCTCTCCG ACATCCGTTG GGAAGATCCA CATTTCGAGT CTGATTACGA CGGCATGGTG
GCCTACGGCC AGTCCAAGAC CGCCAATGTG CTGTTCGCCG TGGAACTGGA CCGGCGGTGG
GCCGACGACG GCGTCCGCGG CTACTCACTG CACCCCGGCG GCATCGTCTC GACCAACCTC
GGGCCGTCGT TCACCCTCGA CGACTGGCGC GCGATGGGTC TGGTCGACGA CGGCGGCCAG
CCGATCGTCG ACCCGGACCG CGACATGAAG ACCCCGCAGC AGGGCGCCTC GACACAGGTG
TTCGCCGCGA CCAGCCCGCA GCTGGCCGAC ATCGGCGGCG TCTACCTGGC GAACAACGAC
ATCGCCCCGC TGGAGGCCGA CGCCACGCCC GTCACCGTCG ACATGGGCGC GGGCCCGCTT
CAGACCACGC CGGGTGTCAC CGGCTACGCG GTCGATCCCG AGTCGGCCGA GCGGCTGTGG
GAGCTCAGCG AGAAACTGCT CGCCTGA
|
|---|
| Protein sequence | MTNKQQPLGS GFTAASTAAD VLAGIDLTGR NAIVTAGHVG LGLETTRALA DAGANVVVAS
RNPETAAAAL VGVERVRVEQ LDLMDPASIE RFVAGYGEAA LHILINNAGI MGGDLVRDAR
GYEAQFATNH LGHFQLTNGL LPALRAADGA RVVEVSSWGH HLSDIRWEDP HFESDYDGMV
AYGQSKTANV LFAVELDRRW ADDGVRGYSL HPGGIVSTNL GPSFTLDDWR AMGLVDDGGQ
PIVDPDRDMK TPQQGASTQV FAATSPQLAD IGGVYLANND IAPLEADATP VTVDMGAGPL
QTTPGVTGYA VDPESAERLW ELSEKLLA
|
|---|
| |