Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_0861 |
Symbol | |
ID | 4646194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 891405 |
End bp | 892907 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639804361 |
Product | transcriptional regulator, CdaR |
Protein accession | YP_951705 |
Protein GI | 120401876 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3835] Sugar diacid utilization regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.975541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0962087 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCCTGC GGGAGGCGCT CGACGATCCG GCAGTGGCGG CGGCCCGGCC CCGCGTCCTG GCCGGCTGGG AGCGGCTGGA CGCCCCGATC CGCTGGGTGC ACACCAGCGA AGTCCTCGAC ATCGCCGAGC TGCTCAGCGG CGGCGAGATG CTGCTGGTCG CCGGGGTGAT CCTCGGCGAC TCCACGCCTG ATCAGCTGCG CTCCTACGTG GACTCGCTGG CCGACGTCGG CGCCGCGGCG CTCGCCGTGG AGCGGCCGCG CATCGGCGTG CTGTCCGAGG CGCTCGTCGA CCGGGCCGTC GCCCGGGGCT TCCCGCTGAT CGAGCTCACC GAGGTGGTCC GCTTCGTCGA GGTGACCCGT GCCCTCAACA GCAGGCTGGT CAACGAATCG GTGCGGGCCC TGCACTTCAA CGACGAGGTC ACCCACATGC TGGCCTGGGT GCTGGCCGCG CAGGGCGACC TCGACGAGAT GGTCGCCGGG TTGAGCGCGC TGAGTGGCTG CGCGATCATG GTGCGCTCGG TGTCGGGGGC GGTGCTCGCG TCGGCGGAGG TGCCGGATGC GCGGCCGCGC AGCTACGCCC ACGTCGCCCC CATCGAGTCG GCGGGCGTCA CGATCGCGAC CCTCGAAGTG CTCCCCCGCC CCGGGGTGGA TCTGCAGATG ATCAACGCGA TCGCCAGACG AGCCCCCGAG TCGCTGGCCC TTGCCCTGCT GCGGTGGCGT CCACTGACGC GCTCGGATCA GGCGGTGCGC GAGGTGTTCC GCCTGCTGGC CCTGGCCGAG GACACCACGC GTCCGCCGTC GCTGCTGGCC GAGACCGCCT CGGCCCTGCG GCGGGCGACG CGCAGCCTCG GGCTGCCGCC GGGCGGTTGG TATGTGGGCG TGGTGGCCAT CAGCGTCGAC GGTCCGCTGC AGGTGGCCGA ACTGGCGGCG GTGCTGAGAC GTGACGAGCG CCAGGTGCTT TCGGAGATCC GCAACGGCCA GTACCGTTCG ATCGTCCGGT TCGACAACCG CACCGACCCC GCAGAGTTGG TGGAAGGCCT TGTCGGCCAG CTCTATTCGA CGGCACTACC CAGCTCCCTG CGCGTCGGGA TCACCGAACC GCAACGCGAG ATGGCCGATG TCGCGACGAC GATGACCGTC GCCGCGACCG CCGCGATGCA TTCCACAGAG AGCGACTATG TCGGCCTGGC GCGTGATTTC ACGCTGGATC ACTTTCTGAC ACAGGTTGAT TCGGCAGCGG TGGAGCGGTT TCTGGACGCC GCGCTCGGGC CGCTGCGGAC CGCGAACCGC TCCGAGGAAC TGATCGCGAC GCTGGCGGCG CTGTTCCGCA CCGGGAGTCG GGTGGCAGCC GCCGAGTCGT TGCGGATCCA CCGGCAGACC ATGTACCAGC GGCTGGCCCG CATCGAATCG ATCCTCGGCC GCAAGCTCGG CACCGCCGAC CGGTCGACCG GGGCCCTGCG GGTCGCGGTG GAGATCGCCG CCGCCCGGGG TGGACCGCGG TGA
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Protein sequence | MSLREALDDP AVAAARPRVL AGWERLDAPI RWVHTSEVLD IAELLSGGEM LLVAGVILGD STPDQLRSYV DSLADVGAAA LAVERPRIGV LSEALVDRAV ARGFPLIELT EVVRFVEVTR ALNSRLVNES VRALHFNDEV THMLAWVLAA QGDLDEMVAG LSALSGCAIM VRSVSGAVLA SAEVPDARPR SYAHVAPIES AGVTIATLEV LPRPGVDLQM INAIARRAPE SLALALLRWR PLTRSDQAVR EVFRLLALAE DTTRPPSLLA ETASALRRAT RSLGLPPGGW YVGVVAISVD GPLQVAELAA VLRRDERQVL SEIRNGQYRS IVRFDNRTDP AELVEGLVGQ LYSTALPSSL RVGITEPQRE MADVATTMTV AATAAMHSTE SDYVGLARDF TLDHFLTQVD SAAVERFLDA ALGPLRTANR SEELIATLAA LFRTGSRVAA AESLRIHRQT MYQRLARIES ILGRKLGTAD RSTGALRVAV EIAAARGGPR
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