Gene Mvan_0702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0702 
Symbol 
ID4643645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp743789 
End bp744247 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content66% 
IMG OID639804202 
Productanti-sigma-factor antagonist 
Protein accessionYP_951546 
Protein GI120401717 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.44246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0163472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATAA CCGATCCATT ACCCGCATCC AGCACCCAGC GGGTGTTCCG ACCGGATCCG 
ACGTCGTTCG AATTGCGCGA AGAGCATCAT CGTGCGACGT TCTCCGCCTG CGAGCTGCCC
CCGTCAACGG TGCTCGTGAC GATCCACGGT GAGGTCGACG CGACCAACAG CATGGCCCTG
GCCTGCTACA TCGAGAAGCG CCTGGGCGGG GCGCGCAAGC TGATCCTCGA CCTGCAGACC
GTGGAGTTCT TCGCCGCCTC GGGGTTTGCC GCATTGTCCA ACATCAACGT CGTCTGCGCG
CGAAGCGGTG TGCGCTGGAC CCTGCTCGCG GGAACACATG TCCGGCGGCT GCTGAGGATC
TGCGACCCGG TGCGCGAGCT ACCCGTGGCC GAGCCGGCCG CCAAGTACTC CCGCACACGC
CCGAGCGATC GCAAGCTCCT CGTTGGTCGG CACGACTAG
 
Protein sequence
MSITDPLPAS STQRVFRPDP TSFELREEHH RATFSACELP PSTVLVTIHG EVDATNSMAL 
ACYIEKRLGG ARKLILDLQT VEFFAASGFA ALSNINVVCA RSGVRWTLLA GTHVRRLLRI
CDPVRELPVA EPAAKYSRTR PSDRKLLVGR HD