| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0328 |
|---|
| Symbol | |
|---|
| ID | 4645630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 361122 |
|---|
| End bp | 362021 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639803836 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_951182 |
|---|
| Protein GI | 120401353 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.280372 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGTTAC GCCAGGTCGA GCATTTCCTC GCCGTCGCCG GCGAAATGAG CTTCACGCGC
GCCGCGGAGC GTGTCCATGT GGTGCAGTCG GCGTTGTCGA CGTCCATCGC GAAGCTCGAA
CGCGAACTCG ACGTCGATTT GTTCGACCGG TCTCGCCAGC AGATTCGACT CACGGCAGCG
GGTGATCGGT TCCTCACCCA CGCCTACGAG GTGCTGCGCG TAAGCCGCGC GGCCGCCGAT
TCGGTCGGCG AGTTCCGCCA ATCACTCATG GGCACAGTTG AGTTCGGATC ACTGATCTCG
TTCGGGCCCA TGGATGTCGG ACGCGCGCTG GGGGACTTCC ACCGCGCGCA CCCCTTTGTC
CGGCTCCGAT TGCGGCTGAG CCAAGCAGGC GCGTCGGCCT ACCTGGGCGC CCTCGTGGAG
GGTTCGCTGG ACCTCGCGCT GGTCTCGGTG CCCGACCGGT TCCCTCGTCA GCTGGAGATG
CGGCTGCTCT TCGCGGAGCC GATGGTCTTC GTGTGCCGTG GTGACCATGC GTTCGCCGAT
CGAGGGACCC TTGATCTCGC CGATGTCGCC CTCGAGGACA TCGTCGGGTT CCCGCCTGAG
TTCGGCTTGC GCCGCCTGAT GGAAGGGGCC TTTCGCGCCG TGGGCGTTGC CCCCCGCACC
CAGTACGAGG TTCCGGCCGG GTTCGCTGCG ATCGCCGACC TCGTTCGCAA CGGGTTGGGC
ACCGCCTTCA TGCCCGCATC AGAAGCCCGC CGGTTCAGTG ACCTGCGGCC CGTCGAACTT
GCCGACCATG TGCTGTGGCA GGTGTATCTG GCCTCGCGTC CGGTTGACCA CCTCACGCCG
GCCACGGCCC GCCTCGCAGA CGCCCTGCTC GATGCCGCCG CTGACGCCCG CGCGCAGTGA
|
|---|
| Protein sequence | MELRQVEHFL AVAGEMSFTR AAERVHVVQS ALSTSIAKLE RELDVDLFDR SRQQIRLTAA
GDRFLTHAYE VLRVSRAAAD SVGEFRQSLM GTVEFGSLIS FGPMDVGRAL GDFHRAHPFV
RLRLRLSQAG ASAYLGALVE GSLDLALVSV PDRFPRQLEM RLLFAEPMVF VCRGDHAFAD
RGTLDLADVA LEDIVGFPPE FGLRRLMEGA FRAVGVAPRT QYEVPAGFAA IADLVRNGLG
TAFMPASEAR RFSDLRPVEL ADHVLWQVYL ASRPVDHLTP ATARLADALL DAAADARAQ
|
|---|
| |