Gene Mvan_0313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0313 
Symbol 
ID4643380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp347239 
End bp347880 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content64% 
IMG OID639803821 
ProductTetR family transcriptional regulator 
Protein accessionYP_951167 
Protein GI120401338 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCG AGGAGCGTCA CCGGAACCGG CGCACTCGTC TCATCGAGGC CGCAACCGAG 
TTGATCGGCA CGCGCGGTGT TGCCGCCGCC ACTGTGACTG CCGTCTGCGC TGAATCAGGC
GTCACGTCAC GCTACTTCTA CCAGCACTTC TCCGGCCGAG ACGCCCTCCT GCGGGCTGTC
TACCAGCAGC TCTATGCCAC CTTCCAGGAG GTGATAGTCG ACGCGATCCC CGATGCCGGC
GAGCCACCGG AGGTGCTGGC GTACGCGCCG ATCCGCAGGC TGGTCAGCAT GATCGACAAC
GACCCTCGGC TGGGTCGGAT CCTGTTCGTG GAATCTGCCA CCGAACCGCT GCTCCGAGAG
CTACGCAGCG AACTGATGGC AGGTTTCACC GACCTCGTCT TGCGCGAAGC CAGACTCCAC
CTCGACATCG CCGACTCCGC CGTGGGGGTG GCCCATTTGG CTTCGACCTT GGGCGTGGGA
GGGCTATTCG AAGTCTTGCG CCGCCGACTC GACGGAGAAC TCGAGTTCAC CACCGATGAA
CTCGTTCAGC ACTGCGCAGG TTTCCTGGGC AGCCTCGGCA ATTACGTGCT GCTGCAGAAC
ACGGACCAGT CGGCCACAAC CGAAGCCCGA CCCCACAGGT AG
 
Protein sequence
MSAEERHRNR RTRLIEAATE LIGTRGVAAA TVTAVCAESG VTSRYFYQHF SGRDALLRAV 
YQQLYATFQE VIVDAIPDAG EPPEVLAYAP IRRLVSMIDN DPRLGRILFV ESATEPLLRE
LRSELMAGFT DLVLREARLH LDIADSAVGV AHLASTLGVG GLFEVLRRRL DGELEFTTDE
LVQHCAGFLG SLGNYVLLQN TDQSATTEAR PHR