Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_0293 |
Symbol | |
ID | 4643360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 328310 |
End bp | 329218 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639803802 |
Product | extracellular solute-binding protein |
Protein accession | YP_951148 |
Protein GI | 120401319 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAACT CGCGCACCGC ACTTTTCGCC GTCCTCGCCG GTGTTGTACT TGCCGGCTGT TCGTCCACGA CTGAGGCGGC GACCACCGAA ACACCCAGCG AATTCGCCGA TCTGGCAGCG TCACCGGCAT GCACCGAGCT GCGCGCCGAG AATCCCGACC TCGCCGGCAA GACCCTCACC AACGCGATCA ACCCCTACAC GCCGGGCTAC GAGACCATCA ATCCGGAAAA CCCCAGTGAA TACCAGGGTT TCGACATCGA TCTGGGCAAC GCGCTCGGCG CCTGCCTGGG CTTCAAAAAC GACTACCTCT CGGTCGGATT CTCCGAACTG ATCCCGACGG TCGCCAGCGG CCAGGCCGAC TGGATCATCT CCAACCTCTA CGCGACAGAA GAGCGCGCCG CCGGCGGCGT CGACTTCATC AGCTACTCAA AGGTGTTCGA CGGGATCCTG GTGGCCAAGG ACAATCCGAA GAACATCACC GGCATCGACA CCTCGCTGTG CGGACTCACG GTGGCGCTCA ACAAGGGATA TGTCGAGGTT CCGCTCGTCG AAGCCGTCGG GCCCGAGTGT GTGGCAACCG GCCTGAAGGC ACCGACCGTC AGCCTGTTCG ATTCCAGCGC CGACTGCACA CAGGCGGTCC TCGCCGGACG CGCAGACGCC TACATGAACG ACATCAACAC CGTCAACGCG TTCGTCGCCG AGCATCCCGA CGAACTCGCC TCCGCAGAAA CCGTCATGCT CGACTACACG ATCGGTATCG GGGTTCCCCA GGGCGACCAC CAGTTCCGCG ACGCCATCCA GGCGGCACTC ACCGAGGTGC AGGCGAGCGG ACTGCAGGAC GAACTGGCCG CCAAATGGAA GCTGTCCGAG AACGCGGTAG CGGCACCCAC AATCCTCAGC GTGGGCTGA
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Protein sequence | MKNSRTALFA VLAGVVLAGC SSTTEAATTE TPSEFADLAA SPACTELRAE NPDLAGKTLT NAINPYTPGY ETINPENPSE YQGFDIDLGN ALGACLGFKN DYLSVGFSEL IPTVASGQAD WIISNLYATE ERAAGGVDFI SYSKVFDGIL VAKDNPKNIT GIDTSLCGLT VALNKGYVEV PLVEAVGPEC VATGLKAPTV SLFDSSADCT QAVLAGRADA YMNDINTVNA FVAEHPDELA SAETVMLDYT IGIGVPQGDH QFRDAIQAAL TEVQASGLQD ELAAKWKLSE NAVAAPTILS VG
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