Gene Mvan_0293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0293 
Symbol 
ID4643360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp328310 
End bp329218 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content63% 
IMG OID639803802 
Productextracellular solute-binding protein 
Protein accessionYP_951148 
Protein GI120401319 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACT CGCGCACCGC ACTTTTCGCC GTCCTCGCCG GTGTTGTACT TGCCGGCTGT 
TCGTCCACGA CTGAGGCGGC GACCACCGAA ACACCCAGCG AATTCGCCGA TCTGGCAGCG
TCACCGGCAT GCACCGAGCT GCGCGCCGAG AATCCCGACC TCGCCGGCAA GACCCTCACC
AACGCGATCA ACCCCTACAC GCCGGGCTAC GAGACCATCA ATCCGGAAAA CCCCAGTGAA
TACCAGGGTT TCGACATCGA TCTGGGCAAC GCGCTCGGCG CCTGCCTGGG CTTCAAAAAC
GACTACCTCT CGGTCGGATT CTCCGAACTG ATCCCGACGG TCGCCAGCGG CCAGGCCGAC
TGGATCATCT CCAACCTCTA CGCGACAGAA GAGCGCGCCG CCGGCGGCGT CGACTTCATC
AGCTACTCAA AGGTGTTCGA CGGGATCCTG GTGGCCAAGG ACAATCCGAA GAACATCACC
GGCATCGACA CCTCGCTGTG CGGACTCACG GTGGCGCTCA ACAAGGGATA TGTCGAGGTT
CCGCTCGTCG AAGCCGTCGG GCCCGAGTGT GTGGCAACCG GCCTGAAGGC ACCGACCGTC
AGCCTGTTCG ATTCCAGCGC CGACTGCACA CAGGCGGTCC TCGCCGGACG CGCAGACGCC
TACATGAACG ACATCAACAC CGTCAACGCG TTCGTCGCCG AGCATCCCGA CGAACTCGCC
TCCGCAGAAA CCGTCATGCT CGACTACACG ATCGGTATCG GGGTTCCCCA GGGCGACCAC
CAGTTCCGCG ACGCCATCCA GGCGGCACTC ACCGAGGTGC AGGCGAGCGG ACTGCAGGAC
GAACTGGCCG CCAAATGGAA GCTGTCCGAG AACGCGGTAG CGGCACCCAC AATCCTCAGC
GTGGGCTGA
 
Protein sequence
MKNSRTALFA VLAGVVLAGC SSTTEAATTE TPSEFADLAA SPACTELRAE NPDLAGKTLT 
NAINPYTPGY ETINPENPSE YQGFDIDLGN ALGACLGFKN DYLSVGFSEL IPTVASGQAD
WIISNLYATE ERAAGGVDFI SYSKVFDGIL VAKDNPKNIT GIDTSLCGLT VALNKGYVEV
PLVEAVGPEC VATGLKAPTV SLFDSSADCT QAVLAGRADA YMNDINTVNA FVAEHPDELA
SAETVMLDYT IGIGVPQGDH QFRDAIQAAL TEVQASGLQD ELAAKWKLSE NAVAAPTILS
VG