| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0292 |
|---|
| Symbol | |
|---|
| ID | 4643359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 326722 |
|---|
| End bp | 328254 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639803801 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_951147 |
|---|
| Protein GI | 120401318 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component
[COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.429579 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGT TCCTGCACTA CCTGACGCTG CCGTGGCTCA TCGACGGCAT GCTCTTCACC
CTCCAGCTCA CGCTGTACGG ATTCACCGGG GGGCTGTTTC TCGGCGTTCT CCTTGCCGCG
CTGCAACTTA CACGGTCACG CGCCCTCACC GCGATAGGGC GTACCTACGT CGTCATCTAT
CGCGGCACCC CGCTGATACT GCAGCTCGTC TTCGTGTTCA CCGCACTACC CCACATCGGC
ATCACCCTGC CGCCAGTCGC CGCCGGCTCG GTCGCCCTCG CGATGAACGA AGCCGTCTTC
ATATCCGAGA TCCTGCGCTC GGGGATCAAG GGCGTGGACC CCGGCCAGTC ACTCGCCGGG
CGAGCGCTCG GCCTGGAACC CCGCAAGCTG ATGCGACGCG TCATCGCCCC GCAGGCATTC
CGGTCGATGG TGCCCGCCCT GGGCAACGAG TTCATCTCCA CCATGAAGAA CTCTGCGCTC
GCGTCGGTTA TCGCCGTGCC CGAGCTCACC CTGCGCACCC AGCAGCTCGC CTCGTCCACC
TTCGACTATT TCTCCATCTA CTTCGCGACC GCCGTAATGT ATCTCGCCCT CACCGCAGTC
CTGAGCATCA TCCAGCTGCT GCTCGAGGAC GCGCTCAACC TCGACCGGGC GAACCGATCG
CTGCTGTCCC GGTTGGACTT CCGGCGCCGG ACGACCACGC CCACCCCTGT TGTGACCCCC
GTCGTCCCGG CCGGTCCGCA GGTCGAGCGG CAGGAGATCG GCGACACCGT CCTCGACATC
CGGGACCTCC ACAAGGCGTA TGGCGCCAAC CAGGTGCTCA ACGGCATCAC GATGTCGGCG
AGGCAGGGCG AGGTCATTGC TCTGCTCGGG CCGAGCGGAT CCGGAAAGAG CACGTTGCTG
CGCACGATCA ACCACCTCGA GTCGGTCGAC ACCGGCACGA TCCGTATCGC CGGGCAGACC
CTCGGCTATG ACGAGTCCGG CATGCCGCTT CCCGAGGGGC GGATCGCGAA GGCCCGGATC
GACGCCGGTG TCGGCATGGT CTTCCAGCAC TTCAACCTGT TCAACCACAT GACGGTGAGG
GAGAACATCG CGGCTCCGCT GCGCTGGATC CAGCGTCTGG GCAAGGAGGA GGCGGCCGAA
CGCGCTGACG CACTGCTGTC GCAGGTGGGT CTCGCGGACA AGGCCGACAC CCTCCCTCAC
CGGTTGTCCG GCGGGCAGCA GCAGCGGGTC GGCATCGCAC GCGCGCTGGC CGCCCGACCC
CGAATCCTGC TGCTCGACGA ACCCACAAGT GCGCTCGACC CCGAACTCGT CGCGGAGGTG
CTCGGCGTCA TCCGCGGCCT GGCCCACCAC CACGGGCTCA CGATGATCAT CGCGACCCAC
CAGTTGCGGT TCGCTCTGGA AGTCGCCGAC CGCGCCGTCT TCATGGCGGG CGGGGTGGTC
GTCGAAGAGG GCAGCGCCGA CCAGGTGATC AACCGACCCC AGGATCCGGC CACGGCCCGC
TTCGTCAACG CGATGCAGCT GGCGGCCGGA TGA
|
|---|
| Protein sequence | MDKFLHYLTL PWLIDGMLFT LQLTLYGFTG GLFLGVLLAA LQLTRSRALT AIGRTYVVIY
RGTPLILQLV FVFTALPHIG ITLPPVAAGS VALAMNEAVF ISEILRSGIK GVDPGQSLAG
RALGLEPRKL MRRVIAPQAF RSMVPALGNE FISTMKNSAL ASVIAVPELT LRTQQLASST
FDYFSIYFAT AVMYLALTAV LSIIQLLLED ALNLDRANRS LLSRLDFRRR TTTPTPVVTP
VVPAGPQVER QEIGDTVLDI RDLHKAYGAN QVLNGITMSA RQGEVIALLG PSGSGKSTLL
RTINHLESVD TGTIRIAGQT LGYDESGMPL PEGRIAKARI DAGVGMVFQH FNLFNHMTVR
ENIAAPLRWI QRLGKEEAAE RADALLSQVG LADKADTLPH RLSGGQQQRV GIARALAARP
RILLLDEPTS ALDPELVAEV LGVIRGLAHH HGLTMIIATH QLRFALEVAD RAVFMAGGVV
VEEGSADQVI NRPQDPATAR FVNAMQLAAG
|
|---|
| |