Gene Mvan_0146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0146 
Symbol 
ID4647040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp158892 
End bp160208 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content73% 
IMG OID639803657 
ProductSMP-30/gluconolaconase/LRE-like region 
Protein accessionYP_951003 
Protein GI120401174 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.699108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGACT TGGTGCGGCA TAAGCCGATC GGCGCGATCC TGCTCGGTGT CGCGCTGCTC 
GCGGGATGCA CAGCCGAGCG GCAGGCCGAA CCCTCCCCGA CGGCGCCCCC ACCGGCGTCC
ACGACTCCGG CCGCACCGGC CGCCGGGACC GCCCGGGTGA CCGTCGAGGT CGACGCGGAC
CTGGCCGGGG CGCCGTTTGA CGCGCCACGG GAGGCGATGG TCCCGCAGGG CTGGACGCTG
TCGGTGTGGG CACGCACCCC GCGGCCGCGG CTGGCCGCCT GGACCCCCGA CGGCGACCTC
CTGGTCTCGG TGCCCAGCGC CGGGCGGGTG CTGCGGTTCG AGCCGCGCGG TGACGGTCCA
CCCGACGAGT CGGTACTGCT CGACGGGCTG GACGAACCGC ACGGCCTGGC GTTCGACGGC
TCGACACTGT ATGTGGCCGA AAGCGATCAG GTCGACGCAT ACCGGTACGC CGCGGGCGCG
GCCACCGAGC CGAGGACCGT CGCGGGCGGG TTGCCTGACG ATCGCAGCCC GGATCTGCGG
GGCGCCTATG CGCACGCCCT CAAGAGCGTG GCTGTCGGCC CCGACGGCGC GGTCTACTTC
TCCATCGGTT CGACCGGCAA CATCTCCGCG CAGGACCGCT CCGCTGATCC GCCCAGGGCA
ACCGTCATGC GGGTGCCACC CGGCGGCGGG CGGGCCGAGC CGTTCGCCAC CGGCGTACGC
AATGGCACCG GGCTCGCCGT GGCGCCCGAC GGTGCGGTCT GGACCGCCAA CAACGGCCGC
GACAACGTCG CCTACCCCGA GCCGGGCCCG TCGTACGGGC AGGTGATCCC GGAGTACGTC
AACGACAACC CGCCCGAACA GATCGCCCGG CTGACGCCCG GCCGCGAGCT CGGATGGCCG
TACTGCAACA ACGTGGATGG GCCCGCGGAC CTGCCGTTCG TCCGGGACGT CCAGACCAAT
CCCGACGGGG CGCTACTGGA CTGCGCGGCG CTGCCGCCGG TCGAACAGAG CATGGGCGCC
CATTCAGCAC CGCTGGGCCT GAGCTTCGTC GACGGCGAGC TTCCCGCGCC TTTCCAGCGC
GGTGCGCTTG TGGGCGTGCA CGGTTCCTGG AACAGGCAAC CGCCGCGCGC CCCCGAGGTC
TCGTTCTATC CGTGGCAGGA CGGGACGCTG GGTGGCCAAC AGACGCTGGT GGGCGGGTTC
CAGACCGACG ACGGGACCCG GTGGGGTAGG CCGGTGGCCG CCGTCGTCGG CCCCGACGGG
GCGGTGTACA TCACCGACGA TGCCGCCGAC GCGATCTACC GGCTGGCGCC GGGTTAG
 
Protein sequence
MRDLVRHKPI GAILLGVALL AGCTAERQAE PSPTAPPPAS TTPAAPAAGT ARVTVEVDAD 
LAGAPFDAPR EAMVPQGWTL SVWARTPRPR LAAWTPDGDL LVSVPSAGRV LRFEPRGDGP
PDESVLLDGL DEPHGLAFDG STLYVAESDQ VDAYRYAAGA ATEPRTVAGG LPDDRSPDLR
GAYAHALKSV AVGPDGAVYF SIGSTGNISA QDRSADPPRA TVMRVPPGGG RAEPFATGVR
NGTGLAVAPD GAVWTANNGR DNVAYPEPGP SYGQVIPEYV NDNPPEQIAR LTPGRELGWP
YCNNVDGPAD LPFVRDVQTN PDGALLDCAA LPPVEQSMGA HSAPLGLSFV DGELPAPFQR
GALVGVHGSW NRQPPRAPEV SFYPWQDGTL GGQQTLVGGF QTDDGTRWGR PVAAVVGPDG
AVYITDDAAD AIYRLAPG