| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0117 |
|---|
| Symbol | |
|---|
| ID | 4648049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 129341 |
|---|
| End bp | 130897 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639803628 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_950974 |
|---|
| Protein GI | 120401145 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.827843 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCGC TGTGGACCGA CGGTCGCATC GAAATCGCCT CCCGCCCGGA CGAGGTGGCA
CAGGCGCACA CTGCCGACGT GCTGGTGGTG GGCGCGGGTA TCACCGGGCT GACCACCGCC
GTGCTGCTGG CCCGCGCCGG CAAGAAGGTG CTGGTGGTCG AGGCGCGCCA CGTAGGTGCG
TGCGCGACGG GCAACACCAC CGGCAAGGTC AGCGTCCTGC AGGGCACCAA GCTGGCGCGC
ATCCGAGCCA AGCACGGGCC CGACGTCCTG AGCGCATATG TGACGGGTAA CGCCGAGGGG
CGGGACTGGC TGATCCGGTA CCACGACGAC CACGGCCTGG CCTACCAGCG CGAGGACGAC
CACTCCTACG CGCAGGCCGA ATCCGGGCTC AGCACGGCCC GAGACGTCCT GGCGGCGTGC
CGGGAGGCGG GGGTCGACGC CCAATGGGTC GACGAGGCCG ACGTGCCGTT CCCGTTCCAA
GGCGGTGTGC GGGTGCGCGA GCAGGCTCAA CTCGACCCGG TGCCCTACCT CGGCAGCCTG
GTCACCGAAC TGGAGAAGCA CGGCGGAACC CTGTTGCAGG GTGTCCGCGC CACCACGGTG
ACCGGGACCG ATCCGGTCCG GGTCCGGTTC CGGTTGACCG ACACCGCGCA GGACACCCGC
GACGAGCAGT TCTCGGTCAC CGCGCGGCAC TGCGTACTCG CCACCGGCAC ACCGATTCTG
GACCGCGGGA TGTTCTTCGC GCGCGTCGAG GCGAAACGGT CGTACTGCCT GGCCTTCGAT
GTGCCGGGTG ACATCACGAC GCCGATGTTC CTCTCGGTGG ACAGCCCCAC CCGATCGGTG
CGGTACGCCC CGACCGCCGC GGGTAGCAAG CTGATCGTCG GAGGGGCGGG CCACCCGGTC
GGCAGGGCCG ACAACCCGAG CAAGGCCGTT GCCGAGTTGT CGCACTGGGC CGCCCTGCAC
TACCCCGGCG CGGTGCAGAC TCATTACTGG TCCGCACAGG ACTACCACCC CGACGACGAG
GTGCCGTTCA TCGGCCCGCT GCTGCCCATG CACGAAAGTG TGCTGGTGGC AACGGGTTTC
GACAAGTGGG GGATGACCAA CGGGGTCGCC GCGGCATTGG CGCTCTCGGC CCGGATACTC
GGTGGGCGGA TGGACTGGGC GCAGACCTTC GCCAGCTGGC GGCTGCACGA ACTGCGTGGG
GTGCCCACCG CGCTGCAGGC CAACATGAAG GTCGGTCTGC ATCTGGCCAA CGGCTGGCTG
GCCCCGCTGA CGTCGTCGGC CGAGGAGCCC GCAGACGGGA CCGGGGTGGT CAGTGGACCG
CCGTGGCGGC TGCGCGCCAC CAGCGTCGTC GACGGTGTGC AGCGCACCGT GTCGCCGGTC
TGTCCCCATC TCGGCGGGAT CGTGAAGTGG AACGACTCCG ACCGGGCCTG GGAGTGTCCA
CTGCACGGCT CCCGATTCGC CCCCGACGGC GCGCTACTCG AGGGCCCGGC CACCCGCGGC
CTGAGCGGCT GCCGCCCGGC TCAGCTCCGC AATGTGTCAG AGGGGTTGCG CCCGTAG
|
|---|
| Protein sequence | MSSLWTDGRI EIASRPDEVA QAHTADVLVV GAGITGLTTA VLLARAGKKV LVVEARHVGA
CATGNTTGKV SVLQGTKLAR IRAKHGPDVL SAYVTGNAEG RDWLIRYHDD HGLAYQREDD
HSYAQAESGL STARDVLAAC REAGVDAQWV DEADVPFPFQ GGVRVREQAQ LDPVPYLGSL
VTELEKHGGT LLQGVRATTV TGTDPVRVRF RLTDTAQDTR DEQFSVTARH CVLATGTPIL
DRGMFFARVE AKRSYCLAFD VPGDITTPMF LSVDSPTRSV RYAPTAAGSK LIVGGAGHPV
GRADNPSKAV AELSHWAALH YPGAVQTHYW SAQDYHPDDE VPFIGPLLPM HESVLVATGF
DKWGMTNGVA AALALSARIL GGRMDWAQTF ASWRLHELRG VPTALQANMK VGLHLANGWL
APLTSSAEEP ADGTGVVSGP PWRLRATSVV DGVQRTVSPV CPHLGGIVKW NDSDRAWECP
LHGSRFAPDG ALLEGPATRG LSGCRPAQLR NVSEGLRP
|
|---|
| |