Gene Mvan_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0042 
Symbol 
ID4644896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp54714 
End bp56093 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content70% 
IMG OID639803553 
Productpurine catabolism PurC domain-containing protein 
Protein accessionYP_950899 
Protein GI120401070 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms 
COG ID[COG2508] Regulator of polyketide synthase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.250157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAGG TGCACGCTGA ACCAGCTGCA CCGACCCTGC GCGACCTCGC GACGGCCGGG 
CTCGGCTTGT CGGTTCCCGA CGGCACGGCC CAGGAGCTGG ATCGGCCCGT CAGCTGGGTG
CACACCACCG AGATGCGCGA TCCGTCCCGA TACCTGCGCG GCGGTGAGTT GGTGTGCACC
GTGGGCATCA GCCTGCACAC CGACCAGGAC TGTGCGACGT TCGTCGACGC GCTGTCACGG
GCCAGGGCTG CCGGCGTGTG TTTCGGGGTG GGCGACGAGC ACGACGCCGT GCCCGAGGCG
CTGCTGGCGC AGTGCCGGCT GCACGGTCTG CCGCTTTTGG TGGCGCCGCC CAGTGTGCCG
TTCAGTGTGG TCAGCCGCTT TGTGGCCGAG TACTGGCTGG GGTCGGAGAT CGCGGTGGCG
CGGGCCACCA ATGCGCTGGT GCCTGAACTG CTTTCCTCGC TGCGCCGGCA CGATTCGCCG
CGGCAGCTGC TCGACAGCGC CGGGCAGCTG CTCGGCTGCT ACTTCCTTCT GGAGCCCGAA
GGCGGCGCGG ACTCCGACGA CGACGCGGTG ACGGTGCCGG TGCCCGGCCT CGGCACGCTG
GTGTGGGTGG GGCGGGGCGA TCATCCGGAG CCCGCGCTGC TGGATCTGAT CGCGCGGTTC
GTGCGCGCCG CGCAGGGCGA GCGCGACATC GAGGCCGCAC TGGCCCGGGA GCGGGTGGGT
CAGCTGCTCT CACTCGTGGA GCGGCGGATG TTGTTGCCGG ACGCGCTGAG TCAGCTGCTG
GAGTGGCCGG GGTTCTCCGC CGGTGAGATC GCGTGCTCGG CGTGGCCTGC CGGTGCCGGT
GCGCTGGTGT CGATGGCGTT TCCGGACGCG TTGATCGGTG ACGCGCCGGA TCTGTGCCTG
ATGCTGACGG TCGGGGCGCT GGAGGTGACC GACGATCTTG CGTTGCCGAC AGGGCATTCG
GCACCGGTGC CGTTGACCGA CATCGGGTCG GCGATCGCGC AGGCCCGCAT CGCGTTGACG
TTGGCCGAGC ACCGCGGCGG GCGGGTCGGG CCGGATCAGT TGAGCACGCT GGAAAGCCTG
TTGGAGCAGT TGCCGCTGGC GCAGCTGGCG CCATTCAAGC AGCTGTTGAT CGCCCCGCTG
GCCGAGTTGG ACAGTCAGCG CGGCACCCAG CACGTGCGCA CGCTGCGAGT ATTCCTGGCG
TGCAACGGAT CCCTGAGCGA AACCGCCAAG GAACTGTTCC TGCACACCAA CACCGTGCGG
CACCGGCTGT CTCGGATTCA GGAGATCACC GGGCGAGACC CGTTGCAGCA CAACGACCTG
ACGGCGTTCG TGATCGGGTT GTGGGCAGCC GACCGGGCGG AGCGGCCAGC CGGGTTGTGA
 
Protein sequence
MSEVHAEPAA PTLRDLATAG LGLSVPDGTA QELDRPVSWV HTTEMRDPSR YLRGGELVCT 
VGISLHTDQD CATFVDALSR ARAAGVCFGV GDEHDAVPEA LLAQCRLHGL PLLVAPPSVP
FSVVSRFVAE YWLGSEIAVA RATNALVPEL LSSLRRHDSP RQLLDSAGQL LGCYFLLEPE
GGADSDDDAV TVPVPGLGTL VWVGRGDHPE PALLDLIARF VRAAQGERDI EAALARERVG
QLLSLVERRM LLPDALSQLL EWPGFSAGEI ACSAWPAGAG ALVSMAFPDA LIGDAPDLCL
MLTVGALEVT DDLALPTGHS APVPLTDIGS AIAQARIALT LAEHRGGRVG PDQLSTLESL
LEQLPLAQLA PFKQLLIAPL AELDSQRGTQ HVRTLRVFLA CNGSLSETAK ELFLHTNTVR
HRLSRIQEIT GRDPLQHNDL TAFVIGLWAA DRAERPAGL