Gene Mvan_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0017 
Symbol 
ID4644797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp22179 
End bp22742 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content64% 
IMG OID639803527 
Productpeptidylprolyl isomerase 
Protein accessionYP_950874 
Protein GI120401045 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.516433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCCTCA GACCAGGCGT GGCACACTGG ATTCCTGTGA CGAGTCCCAT TCAGACCGCG 
ACCGCGACAC TGCACACCAA CCGCGGCGAT ATCAAAATCG CACTCTTCGG AAACCACGCC
CCCAAGACCG TGTCCAACTT CGTGGGACTG GCCCAGGGCA CGAAGGAATA CAGCACTGAG
AACGCCTCGG GCGGCTCGTC GGGCCCGTTC TACGACGGGG TGATCTTCCA CCGCGTCATC
GAAGGGTTCA TGATCCAGGG CGGCGACCCG ACCGGTACCG GACGCGGCGA CGCGGGCTAC
AAGTTCGCCG ACGAATTCCA TCCGGAGCTT CAGTTCGACA AGCCCTACCT GCTGGCGATG
GCCAACGCCG GCCCGGGTAC CAACGGCTCG CAGTTCTTCA TCACCGTGAC CGAGACGCCG
CACCTGAACC GGCGCCACAC GATCTTCGGA GAGGTCGTCG ATCCGGAGTC GCGCAAGGTC
GTCGACGCGA TCGCCACCAC CGCCACCGAC CGCAGCGACC GTCCCACCGA CCCGGTCGTG
ATCGAGTCGA TCACCATCTC TTAG
 
Protein sequence
MALRPGVAHW IPVTSPIQTA TATLHTNRGD IKIALFGNHA PKTVSNFVGL AQGTKEYSTE 
NASGGSSGPF YDGVIFHRVI EGFMIQGGDP TGTGRGDAGY KFADEFHPEL QFDKPYLLAM
ANAGPGTNGS QFFITVTETP HLNRRHTIFG EVVDPESRKV VDAIATTATD RSDRPTDPVV
IESITIS