Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3712 |
Symbol | |
ID | 4623392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 4520098 |
End bp | 4521081 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639798820 |
Product | putative glycoporin |
Protein accession | YP_944986 |
Protein GI | 119947306 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.87556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT CTATTCTAGC TTCGAGCATC CTTGCTTTAT TGGTAGCATC TGCAGCGAAT GCAGGTCAAA CATTTGATAC AGCTGCTGGT TCTTTATACC TAGGTGGTGA TGTTGAGTTT GATTACACAA GCCAAACAAA TGATAATGTA ACTTCAGGCG GTCGTTTATT AATTGATATC CACGGTCAGA AAGTGTTAGA CAATGGTGCG TTTGCCTCAT TTGCTGTGGC ACCTACTTTT GGTCAAACAG GTGGTACTGG TACTGATGAT GTTAAATTTG CCTTTGGTAT GCAAAATGAC TGGAGCTTAA CAGTTGGCCG TTTTGAAGCA CAAGATCTTT CACCTGCTGG TCAAGATACT TATGTAGCTT CATCTGGTAC TACTATGTAC CGCGCAGCCA CTGCACGTGG GCGTGTTAGT GGTTCTGGTG ATGCACAAGC AACCTTTAAT AAAACAATGT CTGCAGCTGG ATTTGAATTA ACTGCTCAGT CGCAAGACAA TGGTGACCTT GTTATCCTTC GCCCTGCTGT GACAGCTGAT TTAAGTAACA AAGTATCAAT GATTGTAGGA CTTGAAGTAC CAGTTGCTGG TAATGAAGTT GCTGGCGTTT CAGACAGTGC CGACTGGTTG GGTGCTGGTG GTGCGCTTAT TCTTCAGGCA ACAGATGCTT TAACATTAAC TGCTCGTGCT GCTTTCTTAG CAGATGATAC AGACCAAACT ACTTCAGTAG ATTCTTACAC AGCCGGTCTT AACGCACAGT ACAACAACTT CTTTATCTCC GCATTATACG GTGAGTCTGA TTCTGATTCT GATGCAAATG ATACAACAGA AACACAAGTT TATGCTTCTT ACAAAATCCC AGCTGTAATG GAAATCAATA ACTTTGATAT CTACTTAGGT GCTGGCTGGT CAGAAGCTGA ACTTAATAAA GTAACTCAAG ATGAAGTAGT TGGTGCTCGT GTACGCTTTA AATACATCTT CTAA
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Protein sequence | MKKSILASSI LALLVASAAN AGQTFDTAAG SLYLGGDVEF DYTSQTNDNV TSGGRLLIDI HGQKVLDNGA FASFAVAPTF GQTGGTGTDD VKFAFGMQND WSLTVGRFEA QDLSPAGQDT YVASSGTTMY RAATARGRVS GSGDAQATFN KTMSAAGFEL TAQSQDNGDL VILRPAVTAD LSNKVSMIVG LEVPVAGNEV AGVSDSADWL GAGGALILQA TDALTLTARA AFLADDTDQT TSVDSYTAGL NAQYNNFFIS ALYGESDSDS DANDTTETQV YASYKIPAVM EINNFDIYLG AGWSEAELNK VTQDEVVGAR VRFKYIF
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