Gene Ping_3712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3712 
Symbol 
ID4623392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4520098 
End bp4521081 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content42% 
IMG OID639798820 
Productputative glycoporin 
Protein accessionYP_944986 
Protein GI119947306 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.87556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT CTATTCTAGC TTCGAGCATC CTTGCTTTAT TGGTAGCATC TGCAGCGAAT 
GCAGGTCAAA CATTTGATAC AGCTGCTGGT TCTTTATACC TAGGTGGTGA TGTTGAGTTT
GATTACACAA GCCAAACAAA TGATAATGTA ACTTCAGGCG GTCGTTTATT AATTGATATC
CACGGTCAGA AAGTGTTAGA CAATGGTGCG TTTGCCTCAT TTGCTGTGGC ACCTACTTTT
GGTCAAACAG GTGGTACTGG TACTGATGAT GTTAAATTTG CCTTTGGTAT GCAAAATGAC
TGGAGCTTAA CAGTTGGCCG TTTTGAAGCA CAAGATCTTT CACCTGCTGG TCAAGATACT
TATGTAGCTT CATCTGGTAC TACTATGTAC CGCGCAGCCA CTGCACGTGG GCGTGTTAGT
GGTTCTGGTG ATGCACAAGC AACCTTTAAT AAAACAATGT CTGCAGCTGG ATTTGAATTA
ACTGCTCAGT CGCAAGACAA TGGTGACCTT GTTATCCTTC GCCCTGCTGT GACAGCTGAT
TTAAGTAACA AAGTATCAAT GATTGTAGGA CTTGAAGTAC CAGTTGCTGG TAATGAAGTT
GCTGGCGTTT CAGACAGTGC CGACTGGTTG GGTGCTGGTG GTGCGCTTAT TCTTCAGGCA
ACAGATGCTT TAACATTAAC TGCTCGTGCT GCTTTCTTAG CAGATGATAC AGACCAAACT
ACTTCAGTAG ATTCTTACAC AGCCGGTCTT AACGCACAGT ACAACAACTT CTTTATCTCC
GCATTATACG GTGAGTCTGA TTCTGATTCT GATGCAAATG ATACAACAGA AACACAAGTT
TATGCTTCTT ACAAAATCCC AGCTGTAATG GAAATCAATA ACTTTGATAT CTACTTAGGT
GCTGGCTGGT CAGAAGCTGA ACTTAATAAA GTAACTCAAG ATGAAGTAGT TGGTGCTCGT
GTACGCTTTA AATACATCTT CTAA
 
Protein sequence
MKKSILASSI LALLVASAAN AGQTFDTAAG SLYLGGDVEF DYTSQTNDNV TSGGRLLIDI 
HGQKVLDNGA FASFAVAPTF GQTGGTGTDD VKFAFGMQND WSLTVGRFEA QDLSPAGQDT
YVASSGTTMY RAATARGRVS GSGDAQATFN KTMSAAGFEL TAQSQDNGDL VILRPAVTAD
LSNKVSMIVG LEVPVAGNEV AGVSDSADWL GAGGALILQA TDALTLTARA AFLADDTDQT
TSVDSYTAGL NAQYNNFFIS ALYGESDSDS DANDTTETQV YASYKIPAVM EINNFDIYLG
AGWSEAELNK VTQDEVVGAR VRFKYIF