Gene Ping_3657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3657 
Symbol 
ID4624075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4469268 
End bp4470410 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content44% 
IMG OID639798773 
ProductAcetyl-CoA carboxylase beta subunit-like protein 
Protein accessionYP_944939 
Protein GI119947259 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR03130] malonate decarboxylase acyl carrier protein
[TIGR03133] malonate decarboxylase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCAA TTAAACTTTT TTTTGAAGGA AATGAAACCA TATCGGACTC AGTGCGTGTT 
GGTAATGTAG GGTCGGGTGA TCTTGAAGTT ATTTTTTTAC CCGCTTCGAG CAATAAAACC
CAGGTGGTTA TTAACACCTC AGTGAATAAC CGTCAGCAAT TATGGTCCGA TATTCTGGAT
AAATGTTTGG GCAAAGAAAG GCTGCTGATG GATGTGTTGA TCAATGATTT TGCGGCGACA
CCCGGGGTTG TTTCACTGCG TGTAGAGCAA GCCCTGGAAC AAATTAAACA GGGGAAAAAC
CCACCCGTTT CCGGTAAATT TGGTATTTCT TTTGTCGAAC TAAGCAGCAG AGAAAGAGCA
CATTATTTAT TAGATGATGG TTCACAAAGA GAAGTATTAG GGCCGGAGAA AAACCTCACT
TCCCCCTGGT TAATTCCTCA GGGCATAGTG CCGCAGTCCG ATGATGGTTG TATTGTTATG
AAAGGAACAA TGAATTCCCT TAATACAGTA GTGATTGGTA TTGAGGGCGC TTTTCAAGGC
GGCGCTATTG GTGAAGTATC AGGTGCTAAA ATGGCTGCGG CATTAGATCT TGCCCTGCAA
GATAACCAGC AGGGAAAAAC CACACAAGTT GTCTTGCTGC TGGAAACGGG GGGAGTGCGC
TTACAGGAAG CTAATTTAGG ATTAGCGGCC ATTGCCGATA TTCATTCTTC TATTGTGGCA
TTGCGTGAGC ATATCAATGT GATCGGTGTT ATTGCCGGTA GTGTTGGCTG TTTTGGTGGT
ATGTCCATGG CTGCGGCATT GTGCAGTACC TTAATTGTGA CTCAAGAAGC ACGTTTAGGA
TTGAATGGTC CTGCGGTTAT TGAACAAGAA GCTGGTATTG AAGAGTATGA CTCGCGCAAT
CGACCCTTTA TTTGGAGTAT TACCGGCGGC GCGCAGCGTC ACGCCAGTGG TTTTGCAGAT
TATTTCAGCC AAGATAATGC CGACGAGATT AAGCAGGCTG TTATTCAAAG GCAAAATAGT
GATTTGAAAA CAGTGCGTTG TGAGCAGATA GAACATTACT TGTCGATCTT TAATAAGATC
AATAAACAAG ATCAATCTAC CCCGGAATTA GTAAGAAAGT ATTTTTCTGA AGGAGCGGCA
TAA
 
Protein sequence
MQPIKLFFEG NETISDSVRV GNVGSGDLEV IFLPASSNKT QVVINTSVNN RQQLWSDILD 
KCLGKERLLM DVLINDFAAT PGVVSLRVEQ ALEQIKQGKN PPVSGKFGIS FVELSSRERA
HYLLDDGSQR EVLGPEKNLT SPWLIPQGIV PQSDDGCIVM KGTMNSLNTV VIGIEGAFQG
GAIGEVSGAK MAAALDLALQ DNQQGKTTQV VLLLETGGVR LQEANLGLAA IADIHSSIVA
LREHINVIGV IAGSVGCFGG MSMAAALCST LIVTQEARLG LNGPAVIEQE AGIEEYDSRN
RPFIWSITGG AQRHASGFAD YFSQDNADEI KQAVIQRQNS DLKTVRCEQI EHYLSIFNKI
NKQDQSTPEL VRKYFSEGAA