Gene Ping_3580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3580 
Symbol 
ID4625166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4396405 
End bp4397268 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content41% 
IMG OID639798696 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_944862 
Protein GI119947182 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGT TAGCAGGCCT AGTTTTTATT ATGTTTTGCC TATTTGGGGG TTTCATGATT 
GTTGGCGGGA ATCTAAAGTT GTTATGGAAA CCCACTGAAA TTTTGATTAT TTTTGGTGCC
GGGTCAGGCG CGTTAATTGT AGGCTCCAGT AAAAACTGCC TGATCTTGAT AACCTCTCAG
CTCAAAGATG TCTTTACTGT TAATCCCTAC AGCAAAGAAT TCTACCGGCA GCTGTTAAGT
CTCCATTATC AGCTGATGCG TGTAAAAAAA ATGCCTTCCG GTGCGAAAGT GCTTGAAAGT
CATGTGGAAG ATTATGAAAA TAGCAGTATT TTCAATCAAT ACCCTTTAGT CTTACGCAAT
GATTTGTTGG TCCATTTTAT CGTTGATAAT TTCAGAATGA CCATTTCAAG CCTCGTTGCC
GCACATGAAA TCGATGCTAC TTTAGAGAGT GAAATTGAGG TGATTACATC GGAGCTGCTT
GAACCTGCGG TGGCGCTAAA AAAATTAGCA GATTCTTTAC CCGGGCTGGG AGTCTTAGGT
GCAGTAATGG GAATTATACT GACGATGCAG TCCATTGACA CTGATATTGC AATGATAGGA
TCGAATATTG CGACCGCATT AATTGGTACC TTTTTAGGTG TTTTTGGCTG TTACTGTCTG
TTTGATCCGC TTAGCTGCGC AGTGAAAAGT AACGTGATGA AATCGATTGT GCCCTTTGAA
GTTGTGAAAC AAATACTGGT TGCGCATGTC TCTAATCGAT CTCCCCTTTT ATCCATAGAC
TCAGGAAGAC GTGCGATTGA AATAGATGAA AAACCGGCCT TTAAAATAAT AGAAGAATGG
GCAGATCAAT TAGATAAGCC TTAG
 
Protein sequence
MIRLAGLVFI MFCLFGGFMI VGGNLKLLWK PTEILIIFGA GSGALIVGSS KNCLILITSQ 
LKDVFTVNPY SKEFYRQLLS LHYQLMRVKK MPSGAKVLES HVEDYENSSI FNQYPLVLRN
DLLVHFIVDN FRMTISSLVA AHEIDATLES EIEVITSELL EPAVALKKLA DSLPGLGVLG
AVMGIILTMQ SIDTDIAMIG SNIATALIGT FLGVFGCYCL FDPLSCAVKS NVMKSIVPFE
VVKQILVAHV SNRSPLLSID SGRRAIEIDE KPAFKIIEEW ADQLDKP