Gene Ping_3566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3566 
Symbol 
ID4625190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4384989 
End bp4385312 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content39% 
IMG OID639798682 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_944848 
Protein GI119947168 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTT CAGCGACTAG CTTGCTCAAT GCAGATCATC TGCAAAAAAT ATCGGATATA 
AAGAGTTCGC CTATCAAGGC AAATAATTTC GCTGCTACCC CGCAGGTCGA TTTTAGTAAA
ACACTTATCT CAGTACTCAA TAGTGTTAAT GATCAGCAGG TGTCTGCAAC CCAGAAGATT
AATGCGGTTG AATTAGGTAA AAGTGATGAT CTGATTGGCG CAGTAGTTGC CGCACAAAAA
GCAAGCCTGT CCTTTACCGC TCTAATGCAG GTTCGAAATA AATTGTTATC AAGTTTTGAT
GAAGTTATGA AGATGTCAGT TTAA
 
Protein sequence
MNISATSLLN ADHLQKISDI KSSPIKANNF AATPQVDFSK TLISVLNSVN DQQVSATQKI 
NAVELGKSDD LIGAVVAAQK ASLSFTALMQ VRNKLLSSFD EVMKMSV