Gene Ping_3556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3556 
Symbol 
ID4625180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4374406 
End bp4374963 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content38% 
IMG OID639798672 
ProductLipocalin family protein 
Protein accessionYP_944838 
Protein GI119947158 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATAA TTTTGATCGC TGTGATTGCT TTTTTACAGT TTGGCTGTAC CGGGGTAGCA 
AAGGATATCA AACCCGTCGA AGGGCTGCAG ACTGAGAAAT ATTTAGGTCT ATGGTATGAG
ATTGCCCGTT TGGATCACTC ATTTGAAAGA GGGATGTCGA ATGTTAAGGC CGAATATTCA
TTGCGAGAAG ATGGCGGGAT AAAGGTCTTA AATAGTGGTT ACTCAAGCGA AGAAAAAGAA
TGGACAACGG CTGAAGGAAA AGCCTATTTT GTCGATGAGA AAAACAAAGG TCACCTAAAA
GTATCATTTT TCGGTCCGTT TTACGGCTCT TATGTGATTT TTAAACTAGA TAAAATAAAT
TACCAGTATG CTTATGTGAC AAGCTACAGC AAAGATTATT TATGGTTATT AGCAAGAACA
GCAACGGTAA CAGAAGCTGT TAAACAAGAT TTTATAAAGA CCGCCAAAAT AAACGGTTTT
GCAACGGATC AACTGATTTT TGTTGATCAA CAAAGCGTGC TCAATGAAGC TGAGAAAGGT
GGAATTACGA AAGAATAA
 
Protein sequence
MRIILIAVIA FLQFGCTGVA KDIKPVEGLQ TEKYLGLWYE IARLDHSFER GMSNVKAEYS 
LREDGGIKVL NSGYSSEEKE WTTAEGKAYF VDEKNKGHLK VSFFGPFYGS YVIFKLDKIN
YQYAYVTSYS KDYLWLLART ATVTEAVKQD FIKTAKINGF ATDQLIFVDQ QSVLNEAEKG
GITKE