| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3550 |
|---|
| Symbol | |
|---|
| ID | 4625264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 4367303 |
|---|
| End bp | 4368286 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639798666 |
|---|
| Product | DNA-binding transcriptional regulator FruR |
|---|
| Protein accession | YP_944832 |
|---|
| Protein GI | 119947152 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02417] D-fructose-responsive transcription factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAG TAGAAATAGC GCGCTTAGCA GGTGTCTCTC GTACCACGGC CAGTTACGTT
ATTAATGGTA AAGCAGAGCA ATATAGGATC AGTGAAAAAA CGCGTCTGAA AGTGATGGCC
GTTGTGGATA AATATAATTA TAAACCTAAC TATGCGGCCA GTACTCTACG GGTGGGCAAT
AGCCGTACCT TTGGTTTAAT TATCCCGGAT CTGGAAAATA CCAGTTACGC TAAAATCGCT
AAATTATTAG AGCGCGATGC CAGAAAATCG GGTTTTCAAT TAATAATCTG TGGTTCGGGT
GATGACATTA ATACGGAAAT GAATGTTGCT GAAAATCTTG TCCGGCGGGG TATTGATGTG
TTAATTGTTG CCACTGCATT ACCCGGTGAT AATGAATTTT ATCGCAATAT ACAGGCTAAA
GGAGTGCCGG TCGTGGCGAT AGACAGGTGT TTGGATGATG AGTGTTTCAG CAGCGTTATT
AGTGAAGATC TTGAAGGCGC TTATCAGTTA TGTGAAGCCC TATTAGAAAA AAATATTAAC
AGTATTGGTT TAATTGGCGC TGGGCCACTG CTGGGCGTCT CCAAAGAGCG AGAATTAGGG
TTTAAAGCTG CACTGGCACA ATACAGTGGC TCGCTTAACA TTCAATACGC TTATGGTGAA
GATTTTAGTA TTGAACAAGG TCAATATTTA GCGCAGCAAT GGATAGATCA GGGTTGTTTC
CCCGATGCCA TTTTAATTAC CTCTTATACA TTATTTGTTG GAGTACTGGA TTGTTTATTA
GCACATCCCG AATTACAGGA AAAAACTGAA CTGGCAACTT TTGGTGATAA CCGCCTGTTA
GATTTTTTAC CTATCAAAGT ACAGTCCTTA CCGCAGCAGT TAGAAGTTAT TGCAGAAAAA
GCACTGCAAC TGGCCTTGCT TGCTGCACAG GGAACTTATA ATCCCAGTGT GGAAGTTGTC
CCGCGCCGGT TGATTAAACG CTAG
|
|---|
| Protein sequence | MKLVEIARLA GVSRTTASYV INGKAEQYRI SEKTRLKVMA VVDKYNYKPN YAASTLRVGN
SRTFGLIIPD LENTSYAKIA KLLERDARKS GFQLIICGSG DDINTEMNVA ENLVRRGIDV
LIVATALPGD NEFYRNIQAK GVPVVAIDRC LDDECFSSVI SEDLEGAYQL CEALLEKNIN
SIGLIGAGPL LGVSKERELG FKAALAQYSG SLNIQYAYGE DFSIEQGQYL AQQWIDQGCF
PDAILITSYT LFVGVLDCLL AHPELQEKTE LATFGDNRLL DFLPIKVQSL PQQLEVIAEK
ALQLALLAAQ GTYNPSVEVV PRRLIKR
|
|---|
| |