Gene Ping_3539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3539 
Symbol 
ID4625270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4357080 
End bp4357643 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content38% 
IMG OID639798655 
Producthypoxanthine-guanine phosphoribosyltransferase 
Protein accessionYP_944821 
Protein GI119947141 
COG category[R] General function prediction only 
COG ID[COG2236] Predicted phosphoribosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0699859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGCA AAGTATATAT TACTGCCCAA CAACTACTTG AAGACTCATT TCGTCTTGCC 
GCACAAGTCT ATGATAGCGG TTTTCGTCCA CAATTTATTG TTGGTATTTG GCGAGGAGGA
GCACCTATTG GTATTGCAGT ACAGGAATAC TTTGATTATA AAAAAGTAGA TACCGACCAT
ATTGCAGTGC GTACCTCTTC CTATTATGGT ATTGGCAAAC AAAGTAAAAC CATAAAAGTT
CATGGCCTGC ATTATATTAT TGAAAATGCC AATGCTGATG ATGGCTTATT AATTGTTGAT
GACGTATTTG ACTCAGGCAG AAGTGTGGTG GCATTAGTTG AAAGACTAAC AGCAGAAATG
CGCTTAAATA TGCCAACCGA TGTACGCATT GCCACGCCCT ATTACAAACC TAAAAATAAA
ACCGTTGCCA TAGTACCTGA TTATTTTATC CATGAATCAG AAGAGTGGTT AGTGTTTCCC
CATGAAGTTT CAGGTTTAAG CATTGAAGAA ATCGTTTCCG GTAAAAGTGA TTTTGAAAAT
ATTAAGCATT TATTCACCGA ATGA
 
Protein sequence
MSSKVYITAQ QLLEDSFRLA AQVYDSGFRP QFIVGIWRGG APIGIAVQEY FDYKKVDTDH 
IAVRTSSYYG IGKQSKTIKV HGLHYIIENA NADDGLLIVD DVFDSGRSVV ALVERLTAEM
RLNMPTDVRI ATPYYKPKNK TVAIVPDYFI HESEEWLVFP HEVSGLSIEE IVSGKSDFEN
IKHLFTE