Gene Ping_3458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3458 
Symbol 
ID4625576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4277385 
End bp4278155 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content31% 
IMG OID639798574 
Productglycosyltransferases-like protein 
Protein accessionYP_944740 
Protein GI119947060 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0190923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0113746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGCACA TTTATATATC TATTGTTTCT CATGGTAATG ATGACGATAT TATTAACAAT 
TATAATTTAA AAGAAATAAA CTCGCTTAAT AATGTCACCG TCATTATCAG AGATAATTTA
TCAAGTCAGA AATTGAAGAA ATACTGTGCA GAGAACCATT TTGAGTATAA CGCTTCGGAT
CCCATATTAG GGTTTGGTGC TAACAATAAC ATTAATTTTG AAGTTGCTTC CAAGTTGGGA
ATGAGTAAAA CAGATTGGTT TGTTTTATTT AATCCGGATC TTGATATATC TGCTGTAATG
ATTCACAAAC TGTCTGATTC TCTCGCTAAT TTTTCAAGTC AGATTTTTGC TATTAATCTT
TTTTTCGATG ATAAATTTTC TAGAATGGAA CATTCATTAA GAAGATTCCC TACTTTTTTT
TCATTTTTCA ATATACTTAA AGGAAAATCT TTTACAGAAG CTTATGATAA AACTGATCTG
GCAGATGGTT CATCAGTTGA TTGGGCGGCG GCCTCATTTT TGGTTTTTCA GGCAGAGTTA
TATGAAAAAT TAAATGGTTT CGATGAGGAC TACTTTATGT ATTTTGAAGA TGTAGATCTT
TGCTATAGAG CTAATCAATT TTATAGTCAG AATGTGGTTT ATTTAAGTAA TGTTAAGGCG
ATTCATGAAG GTGCATACAA AAATAGAAAA CTATTTTCTA AACATTTTAG ATGGTATTTT
TCGAGCCTGC TGAGATTCCT ATTTAAAAGC ACTTTCGAGA CTAAAAGATG A
 
Protein sequence
MAHIYISIVS HGNDDDIINN YNLKEINSLN NVTVIIRDNL SSQKLKKYCA ENHFEYNASD 
PILGFGANNN INFEVASKLG MSKTDWFVLF NPDLDISAVM IHKLSDSLAN FSSQIFAINL
FFDDKFSRME HSLRRFPTFF SFFNILKGKS FTEAYDKTDL ADGSSVDWAA ASFLVFQAEL
YEKLNGFDED YFMYFEDVDL CYRANQFYSQ NVVYLSNVKA IHEGAYKNRK LFSKHFRWYF
SSLLRFLFKS TFETKR