Gene Ping_3345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3345 
Symbol 
ID4625724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4134606 
End bp4135010 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content34% 
IMG OID639798458 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_944631 
Protein GI119946951 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAA GCAAGAAAAA TTTTCAACAG CCTGCCCGAT TTGAGTTGTT ACCCCTGCTT 
GATGTGATTT TTTTATTACT GATTTTTTTT GTTTTTGTTA TGCTTAAAAT GACTATGCAA
AGTAGTATTA ATATTGAATT ACCGCAGTTA GTTGATAGCC AGCAACAAAC TGAGGAGCTG
TTAGTTATTA GTATAAACAG CAAAAATCAA CTTTTTATTA ATGAGGAAGT AACCACTGAA
GAGCTTATGT TGGCGCAAGT TATTAACTTG CAAAAAGACA ATAAATTACC CATATTAATA
CGTGGTGACA AAAAATCCGA TTTAGGTGTC GCCTTATCAA TTTTGGATAA ACTACGCTTG
TCCGGATTCC ATCATGTTGC TTTTGCAACC GACAAAGACC AATGA
 
Protein sequence
MKLSKKNFQQ PARFELLPLL DVIFLLLIFF VFVMLKMTMQ SSINIELPQL VDSQQQTEEL 
LVISINSKNQ LFINEEVTTE ELMLAQVINL QKDNKLPILI RGDKKSDLGV ALSILDKLRL
SGFHHVAFAT DKDQ