| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3253 |
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| Symbol | |
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| ID | 4626323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 4016954 |
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| End bp | 4017370 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639798360 |
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| Product | PilD-dependent protein |
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| Protein accession | YP_944539 |
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| Protein GI | 119946859 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4967] Tfp pilus assembly protein PilV |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATAG CTGAAAAAGG ATTTACCTTA TTTGAAGTGC TGGTGTCTAT GTTTATCACC
GGCGTGGCGC TACTCGGGCT TGCAAAGATG GAGTTGTATA TTCTAAAGTC ATCGCAGTCG
AGTTTTGACT ATACGGTCGC GACAATCCGG GCTAACAATT TTGTGGATGC AGTGTGGGCA
GGATGTTATA CACAAAGCGC ATCTTCCGGT ACCTATGCGG GTATTATCAA TCCTTGGAAA
GATGAAATAA GCGCAGCGGG CATGATTACC TATGAAGGTT ACCCGCCTGC TTCATATGCA
CAGGAGACAA CAGTAAAAAT TTCTTGGACA GATCCGCGCT TCGCGGATCA TGTTACTTCC
AATAGTACCT TAACCCTAAA CGTGAAATTC CCTGATGATA ATTGCGGGGC TCCATAG
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| Protein sequence | MKIAEKGFTL FEVLVSMFIT GVALLGLAKM ELYILKSSQS SFDYTVATIR ANNFVDAVWA
GCYTQSASSG TYAGIINPWK DEISAAGMIT YEGYPPASYA QETTVKISWT DPRFADHVTS
NSTLTLNVKF PDDNCGAP
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