| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3233 |
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| Symbol | treR |
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| ID | 4626362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 3989171 |
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| End bp | 3990127 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639798340 |
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| Product | trehalose repressor |
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| Protein accession | YP_944519 |
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| Protein GI | 119946839 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02405] trehalose operon repressor, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0123799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAAAAA AATTAACTAT TCTTGATATC GCAAAGTTAG CCGGGGTTGG AAAATCGACC
GTTTCCCGTG TCTTAACTAA CGACCCTAAA GTAAAGGCGA GTACCCGAGA AAAAGTGCAG
CGACTTATTC AGGAATCTGG TTTTGTGCCA TCGAAATCAG CCCAAATTAT GGGTGGCGGG
CGTACCAACG TTATCGGTAT TATTTTATCT CGTTTGGATT CTGCCTCCGA AAATAAAGTG
GTGAGTGCTA TTCTGGAAGT GATCTATGCA GCGGGTTACG ATGCGCTGAT TATGGAAGGG
CAATTTAGTG CAGCAAAAAC CGATGAGCAT TTAGCCGTTT TACAAAAAAA AGATGTTGAT
GGTGTTATTT TATTTGGTTT TACCGGCTGT GATTTATCAA GCGTTGAAAA GTTAGCCCAT
AAAGCCGTGG TTATTGCCGT TGATAGTAAG CGTGTTTCAT CTGTTGGTTA TGATAATGAT
GGCATTATTA AACAGGCAAT GAACTATATG CAGGCACAGG GAAAGCAGCA TATTAGTTTT
ATCGGTGTCG ATATTAAGGA TAAAACAACG GGCTTAATGC GTCTTAATGC TTATTTGGAT
TATTGTCAGT CTGCCAATAT AAAACCGCAC TATCAAACAG GGTTACTGAA TTATCACAGT
GCTTATGAAC TCACTGATTT GGTGCTGATG CCTGAAACAG AGGCAATTGT TTGTGCCAGT
GATACCTTAG CGATGGGGGT TGCTAAACGT CTTCAGGAAC TTGGCCGCAG CGAAATACTG
GTATCAGGTG TGGGGGCAAC AGATTTATTA GCCTTTATTT TTCCAAATAC ATTCAGTATC
GATCCCGGTT ATTACGCGGT AGGCAAAACT TCTGCAGATT TACTTATCAA ACAGTTAGAG
GGCGGACGCG AAGTGATGCA CATTACCCAA CAGGCCTTCC TAGCTAACCC ATCTTAA
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| Protein sequence | MTKKLTILDI AKLAGVGKST VSRVLTNDPK VKASTREKVQ RLIQESGFVP SKSAQIMGGG
RTNVIGIILS RLDSASENKV VSAILEVIYA AGYDALIMEG QFSAAKTDEH LAVLQKKDVD
GVILFGFTGC DLSSVEKLAH KAVVIAVDSK RVSSVGYDND GIIKQAMNYM QAQGKQHISF
IGVDIKDKTT GLMRLNAYLD YCQSANIKPH YQTGLLNYHS AYELTDLVLM PETEAIVCAS
DTLAMGVAKR LQELGRSEIL VSGVGATDLL AFIFPNTFSI DPGYYAVGKT SADLLIKQLE
GGREVMHITQ QAFLANPS
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