Gene Ping_3166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3166 
Symbol 
ID4624712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3897806 
End bp3898384 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content43% 
IMG OID639798270 
Productglycerol uptake facilitator protein 
Protein accessionYP_944453 
Protein GI119946773 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0972296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCGCG AGCTTATAGG CACGGGCCTG CTGATATTTT TTGTTGTCGG TTGTATTGCC 
ACGCTAGTGT TAACAGGGGT AAGTTTTGGC CAATGGAAAA TCAGTATCAT GTTGGATATG
AGCGGTGCCA TATGCTGTAC TGCCGGTATT TTTGGTGCGC ATATAAATCC TGCAGCGACC
ATCACGCTGG CTGCTTTTCT TGGTTTTGAA AAAGAAAAGT CTTACCTTTA TATAGCTGCG
CAACTGGCAG CCACATTTTG TAGTGCAGCT TTAATTTATG CTTTCAGCAA TCTGTTTACT
GACGATGAAA TAGCTCACGG CTTTTTACAC AATAGTGAGG CGGCATTATC AACTGCCGGT
ATTTTCTCAA CCTACCCGCT CCCGTCATTC TTTATTCTTG GCACATTTTC AATCAAATTT
TTCATTACTG CTGTAATTAT ATTCGCTATT TTAGCGCTCA ATAATCAAAG CAACGGTGCA
CCGCAGGGTG TAATGCCCTC TTTTAATCGG TCTTGTAGTT GCAGTTATCG GCCCTTCTTT
AGACCCGCGA ACGGGTTTTG TGATAAATCT GGCGAGTGA
 
Protein sequence
MHRELIGTGL LIFFVVGCIA TLVLTGVSFG QWKISIMLDM SGAICCTAGI FGAHINPAAT 
ITLAAFLGFE KEKSYLYIAA QLAATFCSAA LIYAFSNLFT DDEIAHGFLH NSEAALSTAG
IFSTYPLPSF FILGTFSIKF FITAVIIFAI LALNNQSNGA PQGVMPSFNR SCSCSYRPFF
RPANGFCDKS GE