Gene Ping_3162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3162 
Symbol 
ID4626892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3893288 
End bp3894136 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content46% 
IMG OID639798266 
Producttype I phosphodiesterase/nucleotide pyrophosphatase 
Protein accessionYP_944449 
Protein GI119946769 
COG category[R] General function prediction only 
COG ID[COG1524] Uncharacterized proteins of the AP superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAATA AAGTAATACT GGTCGTTCTA GATGGCCTTG CATATAGCAC GGCTGAGCAA 
TGTATGGGCT TTTTGCATGC CTTAAAAGAA CAAGGGACAG CGACACTGTA TAAATTACAG
TGTGAGCTTC CATCAATGTC CCGCCCGCTG TATGAAACTA TCCTTACTGC TACAAGGCCT
GCTGAAAGCG GTATTGTTCA TAACAATGTG GTACGTAACT CTACCCAAAG CAGTATCTTT
AGTTTGGCTC GGAAAAATAA TTTAACCACG GCTGCAGCGG CTTATCACTG GTTTAGTGAA
CTGTACAATA TAGCGCCCTT TGATGCTGTC AGGGATCGTT TTACCGAAGC ACCTGAGCAA
TTAATCCAAT ACGGCTGTTT TTATAATGAA AACCATTATC CCGATTGCCA TTTATACCTC
GATGCTGAAT GGTTACGCCG TAAATACGAT CCGGATTTCC TGTTAGTGCA TCCTATGAAT
ATTGATGATG CGGGTCACCG TGCCGGGCTT GATAGTGCGC ATTATCGTAA TACCGCCCGT
CACTCGGATC TGTCGTTGTC TTATCATCTG CCTGAATGGA TAGCAGCCGG ATATCAGATT
CTGATTACTG CGGATCATGG CATGAACAGT GATAAAAGCC ATGGTGGCAC CTTATCGGAA
GAACGCGACA TTCCTTTGTT CGTGATTGGC GATCGTTTTT CCCATCAAGC TGAATGCCTG
CCTCTGCAAA CTGACCTCTG CGGCGTGGTG TGTGATCTGC TGGGAATACA AGATCACGCA
AAACCCGTAA CGGAAGGTCT GTTATGTCAA GCGCCAGATG AAAATCTCAC TTATCAGGGT
GCTGCCTAA
 
Protein sequence
MSNKVILVVL DGLAYSTAEQ CMGFLHALKE QGTATLYKLQ CELPSMSRPL YETILTATRP 
AESGIVHNNV VRNSTQSSIF SLARKNNLTT AAAAYHWFSE LYNIAPFDAV RDRFTEAPEQ
LIQYGCFYNE NHYPDCHLYL DAEWLRRKYD PDFLLVHPMN IDDAGHRAGL DSAHYRNTAR
HSDLSLSYHL PEWIAAGYQI LITADHGMNS DKSHGGTLSE ERDIPLFVIG DRFSHQAECL
PLQTDLCGVV CDLLGIQDHA KPVTEGLLCQ APDENLTYQG AA